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首页> 外文期刊>BMC Systems Biology >Metabolic modelling of polyhydroxyalkanoate copolymers production by mixed microbial cultures
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Metabolic modelling of polyhydroxyalkanoate copolymers production by mixed microbial cultures

机译:混合微生物培养生产聚羟基链烷酸酯共聚物的代谢模型

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Background This paper presents a metabolic model describing the production of polyhydroxyalkanoate (PHA) copolymers in mixed microbial cultures, using mixtures of acetic and propionic acid as carbon source material. Material and energetic balances were established on the basis of previously elucidated metabolic pathways. Equations were derived for the theoretical yields for cell growth and PHA production on mixtures of acetic and propionic acid as functions of the oxidative phosphorylation efficiency, P/O ratio. The oxidative phosphorylation efficiency was estimated from rate measurements, which in turn allowed the estimation of the theoretical yield coefficients. Results The model was validated with experimental data collected in a sequencing batch reactor (SBR) operated under varying feeding conditions: feeding of acetic and propionic acid separately (control experiments), and the feeding of acetic and propionic acid simultaneously. Two different feast and famine culture enrichment strategies were studied: (i) either with acetate or (ii) with propionate as carbon source material. Metabolic flux analysis (MFA) was performed for the different feeding conditions and culture enrichment strategies. Flux balance analysis (FBA) was used to calculate optimal feeding scenarios for high quality PHA polymers production, where it was found that a suitable polymer would be obtained when acetate is fed in excess and the feeding rate of propionate is limited to ~0.17 C-mol/(C-mol.h). The results were compared with published pure culture metabolic studies. Conclusion Acetate was more conducive toward the enrichment of a microbial culture with higher PHA storage fluxes and yields as compared to propionate. The P/O ratio was not only influenced by the selected microbial culture, but also by the carbon substrate fed to each culture, where higher P/O ratio values were consistently observed for acetate than propionate. MFA studies suggest that when mixtures of acetate and propionate are fed to the cultures, the catabolic activity is primarily guaranteed through acetate uptake, and the characteristic P/O ratio of acetate prevails over that of propionate. This study suggests that the PHA production process by mixed microbial cultures has the potential to be comparable or even more favourable than pure cultures.
机译:背景技术本文介绍了一种代谢模型,该模型描述了使用乙酸和丙酸的混合物作为碳源材料的混合微生物培养物中聚羟基链烷酸酯(PHA)共聚物的生产。在先前阐明的代谢途径的基础上建立了物质和能量平衡。推导了乙酸和丙酸混合物上细胞生长和PHA产生的理论产率与氧化磷酸化效率,P / O比的函数关系式。氧化磷酸化效率由速率测量值估算,这反过来又可以估算理论收率。结果该模型通过在不同进料条件下操作的测序间歇反应器(SBR)中收集的实验数据进行了验证:分别进料乙酸和丙酸(对照实验),同时进料乙酸和丙酸。研究了两种不同的盛宴和饥荒文化富集策略:(i)用乙酸盐或(ii)用丙酸盐作为碳源材料。针对不同的饲养条件和培养物富集策略进行了代谢通量分析(MFA)。助焊剂平衡分析(FBA)用于计算高质量PHA聚合物生产的最佳进料方案,发现当乙酸过量进料且丙酸酯的进料速率限制为〜0.17 C-时,将获得合适的聚合物。摩尔/(C-mol.h)。将结果与已发表的纯培养物代谢研究进行了比较。结论与丙酸盐相比,乙酸盐更有利于微生物培养物的富集,PHA的储存通量和产率更高。 P / O比不仅受所选微生物培养物的影响,而且还受喂入每种培养物的碳底物的影响,在该培养物中,始终观察到乙酸盐的丙酸/ O比值高于丙酸盐。 MFA研究表明,当将乙酸盐和丙酸盐的混合物喂入培养物中时,分解代谢活性主要是通过乙酸盐的摄取来保证的,并且乙酸盐的特征性P / O比丙酸盐的P / O比值占优势。这项研究表明,混合微生物培养物生产PHA的过程可能比纯培养物具有可比性甚至更好。

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