首页> 外文期刊>BMC Urology >A segregation index combining phenotypic (clinical characteristics) and genotypic (gene expression) biomarkers from a urine sample to triage out patients presenting with hematuria who have a low probability of urothelial carcinoma
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A segregation index combining phenotypic (clinical characteristics) and genotypic (gene expression) biomarkers from a urine sample to triage out patients presenting with hematuria who have a low probability of urothelial carcinoma

机译:从尿液样本中结合表型(临床特征)和基因型(基因表达)生物标志物的隔离指数,以分类出尿路上皮癌可能性较低的血尿患者

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Background Hematuria can be symptomatic of urothelial carcinoma (UC) and ruling out patients with benign causes during primary evaluation is challenging. Patients with hematuria undergoing urological work-ups place significant clinical and financial burdens on healthcare systems. Current clinical evaluation involves processes that individually lack the sensitivity for accurate determination of UC. Algorithms and nomograms combining genotypic and phenotypic variables have largely focused on cancer detection and failed to improve performance. This study aimed to develop and validate a model incorporating both genotypic and phenotypic variables with high sensitivity and a high negative predictive value (NPV) combined to triage out patients with hematuria who have a low probability of having UC and may not require urological work-up. Methods Expression of IGFBP5, HOXA13, MDK, CDK1 and CXCR2 genes in a voided urine sample (genotypic) and age, gender, frequency of macrohematuria and smoking history (phenotypic) data were collected from 587 patients with macrohematuria. Logistic regression was used to develop predictive models for UC. A combined genotypic-phenotypic model (G?+?P INDEX) was compared with genotypic (G INDEX) and phenotypic (P INDEX) models. Area under receiver operating characteristic curves (AUC) defined the performance of each INDEX: high sensitivity, NPV >0.97 and a high test-negative rate was considered optimal for triaging out patients. The robustness of the G?+?P INDEX was tested in 40 microhematuria patients without UC. Results The G?+?P INDEX offered a bias-corrected AUC of 0.86 compared with 0.61 and 0.83, for the P and G INDEXs respectively. When the test-negative rate was 0.4, the G?+?P INDEX (sensitivity?=?0.95; NPV?=?0.98) offered improved performance compared with the G INDEX (sensitivity?=?0.86; NPV?=?0.96). 80% of patients with microhematuria who did not have UC were correctly triaged out using the G?+?P INDEX, therefore not requiring a full urological work-up. Conclusion The adoption of G?+?P INDEX enables a significant change in clinical utility. G?+?P INDEX can be used to segregate hematuria patients with a low probability of UC with a high degree of confidence in the primary evaluation. Triaging out low-probability patients early significantly reduces the need for expensive and invasive work-ups, thereby lowering diagnosis-related adverse events and costs.
机译:背景血尿可能是尿路上皮癌(UC)的症状,排除在初次评估中具有良性病因的患者具有挑战性。接受泌尿科检查的血尿患者对医疗系统造成重大的临床和财务负担。当前的临床评估涉及个别缺乏准确确定UC敏感性的过程。结合了基因型和表型变量的算法和列线图主要集中在癌症检测上,未能提高性能。这项研究旨在开发和验证一个模型,该模型结合了具有高敏感性和高阴性预测值(NPV)的基因型和表型变量,以分流患有UC可能性低且可能不需要泌尿科检查的血尿患者。方法收集587例大血尿患者的尿液样本(基因型)中IGFBP5,HOXA13,MDK,CDK1和CXCR2基因的表达以及年龄,性别,大血尿频率和吸烟史(表型)数据。 Logistic回归用于开发UC的预测模型。将组合的基因型-表型模型(Gα+ΔPINDEX)与基因型(GINDEX)和表型(PINDEX)模型进行比较。接收器工作特征曲线(AUC)下的面积定义了每个INDEX的性能:高灵敏度,NPV> 0.97和高测试阴性率被认为是对患者进行分类的最佳选择。在40名无UC的微血尿患者中测试了Gβ+ΔPINDEX的稳健性。结果G + + P INDEX提供的偏差校正后的AUC为0.86,而P和G INDEX分别为0.61和0.83。当测试阴性率为0.4时,与G INDEX(灵敏度≤0.86;NPV≤0.96)相比,Gα+ΔPINDEX(灵敏度α=≤0.95;NPVα=≤0.98)具有更好的性能。 。没有使用UC的80%的微血尿患者使用G?+ΔPINDEX进行了正确分类,因此不需要进行全面的泌尿科检查。结论采用G + + P INDEX可显着改变临床用途。 G?+?P INDEX可用于以较低的UC可能性对血尿患者进行隔离,并在初步评估中具有较高的置信度。尽早对低概率患者进行分类可以显着减少对昂贵的侵入性检查的需求,从而降低诊断相关的不良事件和费用。

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