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Automatic segmentation of microcystic macular edema in OCT

机译:OCT中微囊性黄斑水肿的自动分割

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Microcystic macular edema (MME) manifests as small, hyporeflective cystic areas within the retina. For reasons that are still largely unknown, a small proportion of patients with multiple sclerosis (MS) develop MME—predominantly in the inner nuclear layer. These cystoid spaces, denoted pseudocysts, can be imaged using optical coherence tomography (OCT) where they appear as small, discrete, low intensity areas with high contrast to the surrounding tissue. The ability to automatically segment these pseudocysts would enable a more detailed study of MME than has been previously possible. Although larger pseudocysts often appear quite clearly in the OCT images, the multi-frame averaging performed by the Spectralis scanner adds a significant amount of variability to the appearance of smaller pseudocysts. Thus, simple segmentation methods only incorporating intensity information do not perform well. In this work, we propose to use a random forest classifier to classify the MME pixels. An assortment of both intensity and spatial features are used to aid the classification. Using a cross-validation evaluation strategy with manual delineation as ground truth, our method is able to correctly identify 79% of pseudocysts with a precision of 85%. Finally, we constructed a classifier from the output of our algorithm to distinguish clinically identified MME from non-MME subjects yielding an accuracy of 92%.
机译:微囊性黄斑水肿(MME)表现为视网膜内小的,低反射性囊性区域。由于目前尚不清楚的原因,一小部分多发性硬化症(MS)患者发展为MME,主要发生在核内层。可以使用光学相干断层扫描(OCT)对这些称为假性囊肿的囊状间隙进行成像,在这些囊状间隙中,它们表现为较小的,离散的,低强度的区域,与周围组织的对比度很高。自动分割这些假性囊肿的能力将使MME的研究比以前更加可能。尽管较大的假性囊肿通常会在OCT图像中非常清晰地出现,但是Spectralis扫描仪执行的多帧平均功能为较小的假性囊肿的外观增加了可观的可变性。因此,仅结合强度信息的简单分割方法效果不佳。在这项工作中,我们建议使用随机森林分类器对MME像素进行分类。强度和空间特征的分类都有助于分类。使用以人工勾画为基础的交叉验证评估策略,我们的方法能够以85%的精度正确识别79%的假性囊肿。最后,我们从算法的输出中构造了一个分类器,以将临床鉴定出的MME与非MME受试者区分开,从而产生92%的准确性。

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