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Novel approaches for the accumulation of oxygenated intermediates to multi-millimolar concentrations

机译:含氧中间体积累至数毫摩尔浓度的新方法

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摘要

Metalloenzymes that utilize molecular oxygen as a co-substrate catalyze a wide variety of chemically difficult oxidation reactions. Significant insight into the reaction mechanisms of these enzymes can be obtained by the application of a combination of rapid kinetic and spectroscopic methods to the direct structural characterization of intermediate states. A key limitation of this approach is the low aqueous solubility (<2 mM) of the co-substrate, O_2, which undergoes further dilution (typically by one-third or one-half) upon initiation of reactions by rapid-mixing. This situation imposes a practical upper limit on [O_2] (and therefore on the concentration of reactive intermediate(s) that can be rapidly accumulated) of ~1-1.3 mM in such experiments as they are routinely carried out. However, many spectroscopic methods benefit from or require significantly greater concentrations of the species to be studied. To overcome this problem, we have recently developed two new approaches for the preparation of samples of oxygenated intermediates: (1) direct oxygenation of reduced metalloenzymes using gaseous O_2 and (2) the in situ generation of O_2 from chlorite catalyzed by the enzyme chlorite dismutase (Cld). Whereas the former method is applicable only to intermediates with half lives of several minutes, owing to the sluggishness of transport of O_2 across the gas-liquid interface, the latter approach has been successfully applied to trap several intermediates at high concentration and purity by the freeze-quench method. The in situ approach permits generation of a pulse of at least 5 mM O_2 within ~1 ms and accumulation of O_2 to effective concentrations of up to ~11 mM (i.e. ~10-fold greater than by the conventional approach). The use of these new techniques for studies of oxygenases and oxidases is discussed.
机译:利用分子氧作为共底物的金属酶催化多种化学上困难的氧化反应。通过将快速动力学和光谱学方法结合用于中间状态的直接结构表征,可以获得对这些酶反应机理的重要见解。该方法的主要局限性是共底物O_2的低水溶性(<2 mM),在通过快速混合引发反应时会进一步稀释(通常稀释三分之一或二分之一)。在常规实验中,这种情况对[O_2](因此对可以迅速积累的反应性中间体的浓度)施加了大约1-1.3 mM的实际上限。但是,许多光谱方法受益于或需要显着更高浓度的待研究物种。为了克服这个问题,我们最近开发了两种制备含氧中间体样品的新方法:(1)使用气态O_2对还原的金属酶进行直接氧合;(2)由亚氯酸盐歧化酶催化的亚氯酸盐原位生成O_2。 (Cld)。尽管前一种方法仅适用于半衰期为几分钟的中间体,但由于O_2跨气液界面的传输速度缓慢,后一种方法已成功应用于通过冷冻捕集高浓度和高纯度的几种中间体-淬火方法。原位方法允许在约1毫秒内产生至少5 mM的O_2脉冲,并积累O_2直至有效浓度高达〜11 mM(即比常规方法大约10倍)。讨论了使用这些新技术研究氧化酶和氧化酶。

著录项

  • 来源
    《Coordination chemistry reviews》 |2013年第1期|234-243|共10页
  • 作者单位

    Department of Chemistry, The Pennsylvania State University, University Park, PA 16802, United States,Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA 16802, United States,Department of Chemistry, 332 Chemistry Building, University Park, PA 16802, United States;

    Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA 16802, United States;

    Department of Chemistry, The Pennsylvania State University, University Park, PA 16802, United States,Department of Chemical Physiology, Scripps Research Institute, La Jolla, CA 92037, United States;

    Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA 16802, United States,Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Cambridge, MA 02115, United States;

    Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA 16802, United States,Kinemed, Emeryville, CA 94608, United States;

    Department of Chemistry, The Pennsylvania State University, University Park, PA 16802, United States,University of North Carolina, Eshelman School of Pharmacy, Chapel Hill, NC 27599, United States;

    Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA 16802, United States;

    Department of Chemistry, The Pennsylvania State University, University Park, PA 16802, United States,Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA 16802, United States,Department of Chemistry, 336 Chemistry Building, University Park, PA 16802, United States;

  • 收录信息 美国《科学引文索引》(SCI);美国《生物学医学文摘》(MEDLINE);
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    oxygen; intermediate; ferryl; superoxo; peroxo; iron; non-heme;

    机译:氧;中间;渡轮超级氧过氧化物铁;非血红素;
  • 入库时间 2022-08-18 03:00:47

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