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From FLOPS to IOPS: The New Bottlenecks of Scientific Computing

机译:从FLOPS到IOPS:科学计算的新瓶颈

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More than a decade ago, the pioneering computer scientist Jim Gray envisioned a fourth paradigm ofscientific discovery that uses computers to solve data-intensive scientific problems. Today, scientificdiscovery, whether observational, in-silico or experimental, requires sifting through and analyzingcomplex, large datasets. For example, plasma simulation simulates billions of particles in a single run,but analyzing the results requires sifting through a single frame (a multi-dimensional array) that is morethan 50 TB big—and that is for only one timestep of a much longer simulation. Similarly, modernobservation instruments also produce large datasets: a two-photon imaging of a mouse brain yields upto 100 GB of spatiotemporal data per hour and electrocorticography (ECoG) recordings yield 280 GB perhour.
机译:十多年前,计算机科学的先驱吉姆(Jim Gray)设想了第四种科学发现范例,该范例使用计算机来解决数据密集型科学问题。如今,无论是观察性的,计算机内的还是实验性的科学发现,都需要筛选和分析复杂的大型数据集。例如,等离子体模拟可以在一次运行中模拟数十亿个粒子,但是要分析结果,就需要筛查一个大于50 TB的单帧(多维阵列),而这只是更长的模拟的一个时间步。同样,现代观测仪器也产生大量数据集:小鼠大脑的双光子成像每小时可产生高达100 GB的时空数据,而皮层脑电图(ECoG)记录则每小时可产生280 GB。

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