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Deep Learning Methods for Lung Cancer Segmentation in Whole-Slide Histopathology Images—The ACDC@LungHP Challenge 2019

机译:全载组织病理学图像肺癌细分的深度学习方法 - 2019年ACDC @ lunghp挑战

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摘要

Accurate segmentation of lung cancer in pathology slides is a critical step in improving patient care. We proposed the ACDC@LungHP (Automatic Cancer Detection and Classification in Whole-slide Lung Histopathology) challenge for evaluating different computer-aided diagnosis (CADs) methods on the automatic diagnosis of lung cancer. The ACDC@LungHP 2019 focused on segmentation (pixel-wise detection) of cancer tissue in whole slide imaging (WSI), using an annotated dataset of 150 training images and 50 test images from 200 patients. This paper reviews this challenge and summarizes the top 10 submitted methods for lung cancer segmentation. All methods were evaluated using metrics using the precision, accuracy, sensitivity, specificity, and DICE coefficient (DC). The DC ranged from 0.7354 +/- 0.1149 to 0.8372 +/- 0.0858. The DC of the best method was close to the inter-observer agreement (0.8398 +/- 0.0890). All methods were based on deep learning and categorized into two groups: multi-model method and single model method. In general, multi-model methods were significantly better (p<0.01) than single model methods, with mean DC of 0.7966 and 0.7544, respectively. Deep learning based methods could potentially help pathologists find suspicious regions for further analysis of lung cancer in WSI.
机译:病理学载玻片中肺癌的准确细分是改善患者护理的关键步骤。我们提出了ACDC @ lunghp(全血肺组织病理学中的自动癌症检测和分类)挑战,用于评估不同的计算机辅助诊断(CADS)方法对肺癌的自动诊断。 ACDC @ LunGHP 2019专注于整个幻灯片成像(WSI)中癌组织的分段(像素明智检测),使用150个训练图像的注释数据集和200名患者的50个测试图像。本文审查了这一挑战,总结了前十大提交的肺癌细分方法。使用指标使用精度,精度,灵敏度,特异性和骰子系数(DC)来评估所有方法。该直流范围从0.7354 +/- 0.1149到0.8372 +/- 0.0858。最佳方法的DC接近观察员间协议(0.8398 +/- 0.0890)。所有方法都基于深度学习,分为两组:多模型方法和单模方法。通常,多模型方法比单一模型方法显着更好(P <0.01),平均直流分别为0.7966和0.7544。基于深度学习的方法可能有助于病理学家找到可疑地区,以进一步分析WSI的肺癌。

著录项

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    Natl Univ Def Technol Coll Aerosp Sci & Engn Changsha 410073 Peoples R China|Hunan Prov Key Lab Image Measurement & Vis Nav Changsha Peoples R China;

    Natl Univ Def Technol Coll Aerosp Sci & Engn Changsha 410073 Peoples R China|Hunan Prov Key Lab Image Measurement & Vis Nav Changsha Peoples R China;

    Eindhoven Univ Technol Dept Math & Comp Sci NL-5600 MB Eindhoven Netherlands|ScreenPoint Med NL-6525 EC Nijmegen Netherlands;

    Natl Univ Def Technol Coll Aerosp Sci & Engn Changsha 410073 Peoples R China|Hunan Prov Key Lab Image Measurement & Vis Nav Changsha Peoples R China;

    Natl Univ Def Technol Coll Aerosp Sci & Engn Changsha 410073 Peoples R China|Hunan Prov Key Lab Image Measurement & Vis Nav Changsha Peoples R China;

    Natl Univ Def Technol Coll Aerosp Sci & Engn Changsha 410073 Peoples R China|Hunan Prov Key Lab Image Measurement & Vis Nav Changsha Peoples R China;

    Pingan Technol Shenzhen 518000 Peoples R China;

    Pingan Technol Shenzhen 518000 Peoples R China;

    Lunit Inc Seoul South Korea;

    Queen Mary Univ London Sch Elect Engn & Comp Sci London England;

    Queen Mary Univ London Sch Elect Engn & Comp Sci London England;

    Beihang Univ Image Proc Ctr Sch Astronaut Beijing 102206 Peoples R China|Beijing Adv Innovat Ctr Biomed Engn Beijing 100191 Peoples R China;

    Beihang Univ Beijing Adv Innovat Ctr Biomed Engn Beijing 102206 Peoples R China|Image Proc Ctr Beijing 102206 Peoples R China|Beihang Univ Sch Astronaut Beijing 102206 Peoples R China;

    Beihang Univ Sch Astronaut AstLab Beijing 102206 Peoples R China;

    Beihang Univ Sch Astronaut AstLab Beijing 102206 Peoples R China;

    Arontier Co Ltd R&D Ctr Seoul South Korea;

    Arontier Co Ltd R&D Ctr Seoul South Korea;

    Frederick Natl Lab Frederick MD USA;

    Frederick Natl Lab Frederick MD USA;

    Natl Taiwan Univ Sci & Technol Ctr Comp Vis & Med Imaging Taipei Taiwan|Natl Taiwan Univ Sci & Technol Grad Inst Biomed Engn Taipei Taiwan|Natl Taiwan Univ Sci & Technol Grad Inst Appl Sci & Technol Taipei Taiwan|AI Explore Taipei Taiwan;

    Natl Taiwan Univ Sci & Technol Ctr Comp Vis & Med Imaging Taipei Taiwan|Natl Taiwan Univ Sci & Technol Grad Inst Biomed Engn Taipei Taiwan|Natl Taiwan Univ Sci & Technol Grad Inst Appl Sci & Technol Taipei Taiwan|AI Explore Taipei Taiwan;

    Res Dept Skychain Global Ekaterinburg Russia;

    Res Dept Skychain Global Ekaterinburg Russia;

    Motorola Solut Inc Plantat Audio Solut Team Ft Lauderdale FL USA;

    Cent South Univ Xiangya Hosp 2 Changsha Peoples R China;

    Lensee Biotechnol Co Ltd Ningbo Peoples R China;

    Cent South Univ Hunan Canc Hosp Changsha Peoples R China;

    Cent South Univ Xiangya Hosp 2 Changsha Peoples R China;

    Mem Sloan Kettering Canc Ctr New York NY 10021 USA;

    Natl Univ Def Technol Coll Aerosp Sci & Engn Changsha 410073 Peoples R China|Hunan Prov Key Lab Image Measurement & Vis Nav Changsha Peoples R China;

    First Hosp Changsha City Changsha Peoples R China;

    First Hosp Changsha City Changsha Peoples R China;

    Radboud Univ Nijmegen Med Ctr Nijmegen Netherlands;

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  • 正文语种 eng
  • 中图分类
  • 关键词

    Artificial intelligence; convolutional neural networks; deep learning; lung cancer;

    机译:人工智能;卷积神经网络;深入学习;肺癌;

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