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Optimization of parameters for semiempirical methods VI: more modifications to the NDDO approximations and re-optimization of parameters

机译:半经验方法VI的参数优化:对NDDO近似值进行了更多修改并对参数进行了重新优化

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摘要

Modern semiempirical methods are of sufficient accuracy when used in the modeling of molecules of the same type as used as reference data in the parameterization. Outside that subset, however, there is an abundance of evidence that these methods are of very limited utility. In an attempt to expand the range of applicability, a new method called PM7 has been developed. PM7 was parameterized using experimental and high-level ab initio reference data, augmented by a new type of reference data intended to better define the structure of parameter space. The resulting method was tested by modeling crystal structures and heats of formation of solids. Two changes were made to the set of approximations: a modification was made to improve the description of noncovalent interactions, and two minor errors in the NDDO formalism were rectified. Average unsigned errors (AUEs) in geometry and ΔHf for PM7 were reduced relative to PM6; for simple gas-phase organic systems, the AUE in bond lengths decreased by about 5 % and the AUE in ΔHf decreased by about 10 %; for organic solids, the AUE in ΔHf dropped by 60 % and the reduction was 33.3 % for geometries. A two-step process (PM7-TS) for calculating the heights of activation barriers has been developed. Using PM7-TS, the AUE in the barrier heights for simple organic reactions was decreased from values of 12.6 kcal/mol-1 in PM6 and 10.8 kcal/mol-1 in PM7 to 3.8 kcal/mol-1. The origins of the errors in NDDO methods have been examined, and were found to be attributable to inadequate and inaccurate reference data. This conclusion provides insight into how these methods can be improved.Electronic supplementary materialThe online version of this article (doi:10.1007/s00894-012-1667-x) contains supplementary material, which is available to authorized users.
机译:现代半经验方法在建模与参数化中用作参考数据的相同类型的分子时,具有足够的准确性。但是,在该子集之外,有大量证据表明这些方法的用途非常有限。为了扩大适用范围,开发了一种称为PM7的新方法。使用实验性和高级从头开始参考数据对PM7进行参数化,并使用新型参考数据进行增强,以更好地定义参数空间的结构。通过模拟晶体结构和固体形成热来测试所得方法。对近似值集进行了两项更改:进行了修改以改进对非共价相互作用的描述,并纠正了NDDO形式主义中的两个小错误。相对于PM6,PM7的几何平均几何无符号误差(AUE)和ΔHf降低了;对于简单的气相有机体系,键长的AUE降低约5%,ΔHf的AUE降低约10%;对于有机固体,ΔHf中的AUE下降了60%,对于几何形状,下降了33.3%。已经开发出了用于计算激活屏障高度的两步过程(PM7-TS)。使用PM7-TS,简单有机反应的势垒高度的AUE值从PM6中的12.6 kcal / mol -1 和10.8 kcal / mol -1 中降低PM7为3.8 kcal / mol -1 。已对NDDO方法中的错误起因进行了检查,发现其原因是参考数据不足和不准确。该结论提供了如何改进这些方法的见解。电子补充材料本文的在线版本(doi:10.1007 / s00894-012-1667-x)包含补充材料,授权用户可以使用。

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