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Active backlight for automating visual monitoring: An analysis of a lighting control technique for Caenorhabditis elegans cultured on standard Petri plates

机译:用于自动视觉监控的有源背光:分析在标准培养皿上培养的秀丽隐杆线虫的照明控制技术

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摘要

Lifespan and healthspan machines can undergo C. elegans image segmentation errors due to changes in lighting conditions, which produce non-uniform images. Most C. elegans monitoring machines use backlight techniques based on the transparency of both the container and media. Backlight illumination obtains high-contrast images with dark C. elegans and a bright background. However, changes in illumination or media transparency conditions can produce non-uniform images, which are currently alleviated by image processing techniques. Besides, these machines should avoid C. elegans exposure to light as much as possible because light stresses worms, and can even affect their lifespan, mainly when using (1) long exposure times, (2) high intensities or (3) wavelengths that come close to ultraviolet. However, if short exposure of worms to light is required for visual monitoring, then light can also be used as a movement stimulus. In this paper, an active backlight method is analysed. The proposed method consists of controlling the light intensities and wavelengths of an illumination dots matrix with PID regulators. These regulators adapt illumination to some changing conditions. The experimental results shows that this method simplifies the image segmentation problem because it is able to automatically compensate not only changes in media transparency throughout assay days, but also changes in ambient conditions, such as smooth condensation on the lid and light derivatives of the illumination source during its lifetime. In addition, the strategic application of wavelengths could be adapted for the requirements of each assay. For instance, a specific control strategy has been proposed to minimise stress to worms and trying to stimulate C. elegans movement in lifespan assays.
机译:由于照明条件的变化,使用寿命和健康期机器可能会发生线虫图像分割错误,从而产生不均匀的图像。大多数秀丽隐杆线虫监测机都使用基于容器和介质透明度的背光技术。背光照明可获取具有深色线虫和明亮背景的高对比度图像。但是,照明或介质透明度条件的变化会产生不均匀的图像,目前图像处理技术已缓解了这种不均匀的图像。此外,这些机器应尽量避免秀丽隐杆线虫暴露于光线下,因为光线会对蠕虫产生压力,甚至可能影响其寿命,主要是在使用(1)长时间曝光,(2)高强度或(3)出现的波长时接近紫外线。但是,如果需要将蠕虫短时间暴露在光线下以进行视觉监控,那么光线也可以用作运动刺激。本文分析了一种有源背光方法。所提出的方法包括用PID调节器控制照明点矩阵的光强度和波长。这些调节器使照明适应某些变化的条件。实验结果表明,该方法简化了图像分割问题,因为它不仅可以自动补偿整个检测日的介质透明度变化,而且还可以自动补偿环境条件的变化,例如盖子上的平滑凝结和照明光源的光导数在其一生中。另外,波长的策略性应用可以适应每种测定的要求。例如,已经提出了一种特定的控制策略,以最小化蠕虫的压力并尝试在寿命测定中刺激秀丽隐杆线虫的运动。

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