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Integrating environmental and neighborhood factors in MaxEnt modeling to predict species distributions: A case study of Aedes albopictus in southeastern Pennsylvania

机译:在MaxEnt建模中整合环境和邻里因素以预测物种分布:以宾夕法尼亚州东南部的白纹伊蚊为例

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摘要

Aedes albopictus is a viable vector for several infectious diseases such as Zika, West Nile, Dengue viruses and others. Originating from Asia, this invasive species is rapidly expanding into North American temperate areas and urbanized places causing major concerns for public health. Previous analyses show that warm temperatures and high humidity during the mosquito season are ideal conditions for A. albopictus development, while its distribution is correlated with population density. To better understand A. albopictus expansion into urban places it is important to consider the role of both environmental and neighborhood factors. The present study aims to assess the relative importance of both environmental variables and neighborhood factors in the prediction of A. albopictus’ presence in Southeast Pennsylvania using MaxEnt (version 3.4.1) machine-learning algorithm. Three models are developed that include: (1) exclusively environmental variables, (2) exclusively neighborhood factors, and (3) a combination of environmental variables and neighborhood factors. Outcomes from the three models are compared in terms of variable importance, accuracy, and the spatial distribution of predicted A. albopictus’ presence. All three models predicted the presence of A. albopictus in urban centers, however, each to a different spatial extent. The combined model resulted in the highest accuracy (74.7%) compared to the model with only environmental variables (73.5%) and to the model with only neighborhood factors (72.1%) separately. Although the combined model does not essentially increase the accuracy in the prediction, the spatial patterns of mosquito distribution are different when compared to environmental or neighborhood factors alone. Environmental variables help to explain conditions associated with mosquitoes in suburban/rural areas, while neighborhood factors summarize the local conditions that can also impact mosquito habitats in predominantly urban places. Overall, the present study shows that MaxEnt is suitable for integrating neighborhood factors associated with mosquito presence that can complement and improve species distribution modeling.
机译:白纹伊蚊是几种感染性疾病的可行载体,例如寨卡病毒,西尼罗河病毒,登革热病毒等。这种入侵物种起源于亚洲,正在迅速向北美温带地区和城市化地区扩展,引起公众健康的重大关注。先前的分析表明,在蚊子季节,温暖的温度和高湿度是白纹曲霉发育的理想条件,而其分布与种群密度相关。为了更好地了解白纹曲霉向城市地区的扩展,重要的是要考虑环境因素和邻里因素的作用。本研究旨在使用MaxEnt(3.4.1版)机器学习算法评估环境变量和邻域因素对宾夕法尼亚州东南部白纹拟南芥存在的相对重要性。开发了三个模型,包括:(1)仅环境变量,(2)仅邻域因子,以及(3)环境变量和邻域因子的组合。比较了三个模型的结果在重要性,准确性和预测的白纹病菌存在的空间分布方面的差异。所有这三个模型都预测了城市中心地区白化曲霉的存在,但是每个模型都有不同的空间范围。与仅具有环境变量的模型(73.5%)和仅具有邻域因子的模型(72.1%)相比,组合模型的准确性最高(74.7%)。尽管组合模型并没有在本质上提高预测的准确性,但与单独的环境或邻里因素相比,蚊子分布的空间格局却有所不同。环境变量有助于解释郊区/农村地区与蚊子相关的条件,而邻里因素则汇总了可能也影响主要在城市地区的蚊子栖息地的当地条件。总体而言,本研究表明,MaxEnt适用于整合与蚊子存在相关的邻域因素,从而可以补充和改善物种分布模型。

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