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The transcriptome of the Bermuda fireworm Odontosyllis enopla (Annelida: Syllidae): A unique luciferase gene family and putative epitoky-related genes

机译:百慕大萤火虫Odontosyllis enopla(Annelida:Syllidae)的转录组:独特的萤光素酶基因家族和推测的表皮相关基因

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摘要

The Bermuda fireworm Odontosyllis enopla exhibits an extremely tight circalunar circadian behavior that results in an impressive bioluminescent mating swarm, thought to be due to a conventional luciferase-mediated oxidation of a light-emitting luciferin. In addition, the four eyes become hypertrophied and heavily pigmented, and the nephridial system is modified to store and release gametes and associated secretions. In an effort to elucidate transcripts related to bioluminescence, circadian or circalunar periodicity, as well as epitoky-related changes of the eyes and nephridial system, we examined the transcriptomic profile of three female O. enopla during a bioluminescent swarm in Ferry Reach, Bermuda. Using the well-characterized luciferase gene of the Japanese syllid Odontosyllis undecimdonta as a reference, a complete best-matching luciferase open reading frame (329 amino acids in length) was found in all three individuals analyzed in addition to numerous other paralogous sequences in this new gene family. No photoproteins were detected. We also recovered a predicted homolog of 4-coumarate-CoA ligase (268 amino acids in length) that best matched luciferase of the firefly Luciola with the best predicted template being the crystal structure of luciferase for Photinus pyralis, the common eastern firefly. A wide variety of genes associated with periodicity were recovered including predicted homologs of clock, bmal1, period, and timeless. Several genes corresponding to putative epitoky-related changes of the eyes were recovered including predicted homologs of a phototransduction gene, a retinol dehydrogenase and carotenoid isomerooxygenase as well as a visual perception related retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase. Genes correlating to putative epitoky-related changes of the nephridia included predicted homologs of nephrocystin-3 and an egg-release sex peptide receptor.
机译:百慕大萤火虫Odontosyllis enopla表现出非常紧密的昼夜节律性行为,导致令人印象深刻的生物发光交配群,这被认为是由于常规萤光素酶介导的发光萤光素的氧化。此外,四只眼睛变得肥大且色素沉着,并且修改了肾病系统以存储和释放配子及相关分泌物。为了阐明与生物发光,昼夜节律或昼夜节律的周期性有关的转录本,以及与眼睛和肾系统的表皮相关的变化,我们检查了百慕大渡轮到达地的三只雌性O. enopla的转录组概况。以日本金龟子Odontosyllis undecimdonta的特征充分的萤光素酶基因为参考,在此新研究中除发现了许多其他同源序列外,在所有三个被分析的个体中均发现了一个完整的最佳匹配的萤光素酶开放阅读框(长度为329个氨基酸)。基因家族。没有检测到光蛋白。我们还回收了预测的4-香豆酸-CoA连接酶同源物(长度为268个氨基酸),与萤火虫Luciola的萤光素酶最匹配,而最佳预测的模板是美国东部萤火虫Photinus pyralis的萤光素酶的晶体结构。恢复了与周期性相关的各种基因,包括时钟,bmal1,周期和永恒的预测同源物。回收了与假定的眼表皮相关变化的几种基因,包括光电导基因,视黄醇脱氢酶和类胡萝卜素异构加氧酶的预测同源物,以及与视知觉相关的视网膜视杆视紫红质敏感性cGMP 3',5'-环磷酸二酯酶。与肾病的推断的表皮相关变化相关的基因包括预测的nephrocystin-3同源物和一个释放卵的性肽受体。

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