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Differential Stability of the Crystallographic Interfaces of Mu- and Kappa-Opioid Receptors

机译:Mu和Kappa类阿片受体晶体界面的微分稳定性

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摘要

The recent mu-opioid receptor (MOPr) and kappa-opioid receptor (KOPr) crystal structures have inspired hypotheses of physiologically relevant dimerization contacts, specifically: a closely packed interface involving transmembrane (TM) helices TM5 and TM6, and a less compact interface, involving TM1, TM2, and helix 8 (H8). While the former was only found in MOPr crystals, similar arrangements of the latter were identified for both KOPr and MOPr. The relevance of these interfaces outside of a crystal lattice is called into question by the possibility that they might be influenced by the specific crystallization conditions. In this study, we have employed umbrella sampling molecular dynamics simulations of coarse-grained representations of the interacting MOPr or KOPr crystallographic structures, in the absence of the T4 lysozyme, and in an explicit lipid-water environment, to determine the strength of receptor dimerization at the different crystallographic interfaces. We note that the shape of the interface plays a dominant role in the strength of the interaction, and the pattern of contacting residues defines the shape of the potential of mean force. This information can be used to guide experiments aimed at exploring the role of dimerization in opioid receptor function.
机译:最近的μ阿片受体(MOPr)和κ阿片受体(KOPr)晶体结构激发了有关生理相关二聚化接触的假说,特别是:涉及跨膜(TM)螺旋TM5和TM6的紧密结合的界面,以及较不紧密的界面,涉及TM1,TM2和螺旋8(H8)。前者仅在MOPr晶体中发现,而后者在KOPr和MOPr中的排列相似。这些界面在晶格外部的相关性因其可能受特定结晶条件影响的可能性而受到质疑。在这项研究中,我们在没有T4溶菌酶的情况下,并且在明显的脂质-水环境中,采用相互作用的MOPr或KOPr晶体结构的粗粒表示的伞状抽样分子动力学模拟,来确定受体二聚化的强度在不同的晶体学界面。我们注意到,界面的形状在相互作用的强度中起主要作用,并且接触残余物的模式定义了平均力势的形状。该信息可用于指导旨在探索二聚化在阿片样物质受体功能中的作用的实验。

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