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Modelling Multi-Pulse Population Dynamics from Ultrafast Spectroscopy

机译:从超快光谱学建模多脉冲种群动力学

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摘要

Current advanced laser, optics and electronics technology allows sensitive recording of molecular dynamics, from single resonance to multi-colour and multi-pulse experiments. Extracting the occurring (bio-) physical relevant pathways via global analysis of experimental data requires a systematic investigation of connectivity schemes. Here we present a Matlab-based toolbox for this purpose. The toolbox has a graphical user interface which facilitates the application of different reaction models to the data to generate the coupled differential equations. Any time-dependent dataset can be analysed to extract time-independent correlations of the observables by using gradient or direct search methods. Specific capabilities (i.e. chirp and instrument response function) for the analysis of ultrafast pump-probe spectroscopic data are included. The inclusion of an extra pulse that interacts with a transient phase can help to disentangle complex interdependent pathways. The modelling of pathways is therefore extended by new theory (which is included in the toolbox) that describes the finite bleach (orientation) effect of single and multiple intense polarised femtosecond pulses on an ensemble of randomly oriented particles in the presence of population decay. For instance, the generally assumed flat-top multimode beam profile is adapted to a more realistic Gaussian shape, exposing the need for several corrections for accurate anisotropy measurements. In addition, the (selective) excitation (photoselection) and anisotropy of populations that interact with single or multiple intense polarised laser pulses is demonstrated as function of power density and beam profile. Using example values of real world experiments it is calculated to what extent this effectively orients the ensemble of particles. Finally, the implementation includes the interaction with multiple pulses in addition to depth averaging in optically dense samples. In summary, we show that mathematical modelling is essential to model and resolve the details of physical behaviour of populations in ultrafast spectroscopy such as pump-probe, pump-dump-probe and pump-repump-probe experiments.
机译:当前先进的激光,光学和电子技术可实现分子动力学的灵敏记录,从单共振到多色和多脉冲实验。通过对实验数据进行整体分析来提取正在发生的(生物)物理相关途径需要对连通性方案进行系统研究。在这里,我们为此提供了一个基于Matlab的工具箱。该工具箱具有图形用户界面,该界面便于将不同的反应模型应用于数据以生成耦合的微分方程。通过使用梯度或直接搜索方法,可以分析任何与时间有关的数据集,以提取与观测值无关的时间相关性。包括用于分析超快泵浦探针光谱数据的特定功能(即chi和仪器响应功能)。包含一个与瞬态相位相互作用的额外脉冲可以帮助解开复杂的相互依赖的路径。因此,通过新理论(包括在工具箱中)扩展了路径的建模,该理论描述了在种群衰减的情况下单个和多个强极化飞秒脉冲对随机定向粒子集合的有限漂白(定向)效果。例如,通常假定的平顶多模光束轮廓适合于更逼真的高斯形状,从而暴露出需要进行多次校正以进行准确的各向异性测量的需求。此外,还证明了与单个或多个强偏振激光脉冲相互作用的种群的(选择性)激发(光选择)和各向异性是功率密度和光束分布的函数。使用现实世界实验的示例值,可以计算出在多大程度上可以有效地定向粒子整体。最后,除了在光密采样中进行深度平均外,该实现还包括与多个脉冲的交互。总而言之,我们显示出数学建模对于建模和解析超快光谱中种群的物理行为的细节至关重要,例如泵浦探针,泵浦探针和泵浦探针实验。

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