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How to Derive Biological Information from the Value of the Normalization Constant in Allometric Equations

机译:如何从等速方程的归一化常数值中导出生物信息

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摘要

Allometric equations are widely used in many branches of biological science. The potential information content of the normalization constant b in allometric equations of the form Y = bXa has, however, remained largely neglected. To demonstrate the potential for utilizing this information, I generated a large number of artificial datasets that resembled those that are frequently encountered in biological studies, i.e., relatively small samples including measurement error or uncontrolled variation. The value of X was allowed to vary randomly within the limits describing different data ranges, and a was set to a fixed theoretical value. The constant b was set to a range of values describing the effect of a continuous environmental variable. In addition, a normally distributed random error was added to the values of both X and Y. Two different approaches were then used to model the data. The traditional approach estimated both a and b using a regression model, whereas an alternative approach set the exponent a at its theoretical value and only estimated the value of b. Both approaches produced virtually the same model fit with less than 0.3% difference in the coefficient of determination. Only the alternative approach was able to precisely reproduce the effect of the environmental variable, which was largely lost among noise variation when using the traditional approach. The results show how the value of b can be used as a source of valuable biological information if an appropriate regression model is selected.
机译:异速方程在生物科学的许多分支中被广泛使用。然而,在形式为Y = bX a 的异形方程中,归一化常数b的潜在信息内容仍然被忽略。为了证明利用这些信息的潜力,我生成了大量的人工数据集,这些数据集类似于生物学研究中经常遇到的数据集,即相对较小的样本,包括测量误差或不受控制的变化。 X的值允许在描述不同数据范围的极限内随机变化,并且将a设置为固定的理论值。常数b设置为描述连续环境变量的影响的值的范围。另外,将正态分布的随机误差添加到X和Y的值。然后使用两种不同的方法对数据进行建模。传统方法使用回归模型估计a和b,而另一种方法将指数a设置为其理论值,而仅估计b的值。两种方法产生的虚拟模型几乎相同,确定系数差异​​小于0.3%。只有替代方法才能精确地再现环境变量的影响,而使用传统方法时,环境变量的影响却在很大程度上损失了噪声。结果表明,如果选择了适当的回归模型,b的值如何可以用作有价值的生物学信息的来源。

著录项

  • 期刊名称 PLoS Clinical Trials
  • 作者

    Pekka Kaitaniemi;

  • 作者单位
  • 年(卷),期 2008(3),4
  • 年度 2008
  • 页码 e1932
  • 总页数 4
  • 原文格式 PDF
  • 正文语种
  • 中图分类
  • 关键词

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