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Complete Genome Sequences of Eight Helicobacter pylori Strains with Different Virulence Factor Genotypes and Methylation Profiles Isolated from Patients with Diverse Gastrointestinal Diseases on Okinawa Island Japan Determined Using PacBio Single-Molecule Real-Time Technology

机译:使用PacBio单分子实时技术从日本冲绳岛上各种消化道疾病患者中分离出的八个具有不同毒力因子基因型和甲基化谱的幽门螺杆菌菌株的完整基因组序列

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摘要

We report the complete genome sequences of eight Helicobacter pylori strains isolated from patients with gastrointestinal diseases in Okinawa, Japan. Whole-genome sequencing and DNA methylation detection were performed using the PacBio platform. De novo assembly determined a single, complete contig for each strain. Furthermore, methylation analysis identified virulence factor genotype-dependent motifs.
机译:我们报告了从日本冲绳县胃肠道疾病患者中分离出的八个幽门螺杆菌菌株的完整基因组序列。使用PacBio平台进行全基因组测序和DNA甲基化检测。从头组装为每个菌株确定了一个完整的重叠群。此外,甲基化分析确定了毒力因子基因型依赖性基序。

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