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Algorithms for left atrial wall segmentation and thickness – Evaluation on an open-source CT and MRI image database

机译:左心房壁分割和厚度的算法–基于开放源CT和MRI图像数据库的评估

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摘要

class="kwd-title">Keywords: Left atrium, Left atrial wall thickness, Myocardium, Atrial fibrillation class="head no_bottom_margin" id="abs0001title">AbstractStructural changes to the wall of the left atrium are known to occur with conditions that predispose to Atrial fibrillation. Imaging studies have demonstrated that these changes may be detected non-invasively. An important indicator of this structural change is the wall’s thickness. Present studies have commonly measured the wall thickness at few discrete locations. Dense measurements with computer algorithms may be possible on cardiac scans of Computed Tomography (CT) and Magnetic Resonance Imaging (MRI). The task is challenging as the atrial wall is a thin tissue and the imaging resolution is a limiting factor. It is unclear how accurate algorithms may get and how they compare in this new emerging area. We approached this problem of comparability with the Segmentation of Left Atrial Wall for Thickness (SLAWT) challenge organised in conjunction with MICCAI 2016 conference. This manuscript presents the algorithms that had participated and evaluation strategies for comparing them on the challenge image database that is now open-source.The image database consisted of cardiac CT (n=10) and MRI (n=10) of healthy and diseased subjects. A total of 6 algorithms were evaluated with different metrics, with 3 algorithms in each modality. Segmentation of the wall with algorithms was found to be feasible in both modalities. There was generally a lack of accuracy in the algorithms and inter-rater differences showed that algorithms could do better. Benchmarks were determined and algorithms were ranked to allow future algorithms to be ranked alongside the state-of-the-art techniques presented in this work. A mean atlas was also constructed from both modalities to illustrate the variation in thickness within this small cohort.
机译:<!-fig ft0-> <!-fig @ position =“ anchor” mode =文章f4-> <!-fig mode =“ anchred” f5-> <!-fig / graphic | fig / alternatives / graphic mode =“ anchored” m1-> class =“ kwd-title”>关键字:左心房,左心房壁厚,心肌,心房颤动 class =“ head no_bottom_margin” id =“ abs0001title”>摘要已知左心房壁结构发生改变的原因是易发生心房颤动。影像学研究表明,可以无创地检测到这些变化。这种结构变化的重要指标是墙的厚度。目前的研究通常在几个离散位置测量壁厚。在计算机断层扫描(CT)和磁共振成像(MRI)的心脏扫描中,使用计算机算法进行密集测量是可能的。由于房壁是薄组织,成像分辨率是一个限制因素,因此这项任务具有挑战性。目前尚不清楚在这个新出现的领域中算法将如何获得准确的结果以及它们如何进行比较。我们通过与MICCAI 2016会议一起组织的左心房壁厚度分割(SLAWT)挑战来解决这个可比性问题。该手稿介绍了参与的算法和评估策略,以便在现在开放源代码的挑战图像数据库上进行比较。图像数据库由心脏CT( n = 10 )和MRI( n = 10 )。总共评估了6种具有不同指标的算法,每种模态中有3种算法。发现在两种模态中用算法分割墙都是可行的。通常,算法缺乏准确性,评估者之间的差异表明算法可以做得更好。确定基准并对算法进行排名,以使将来的算法可以与本文中介绍的最新技术一起排名。还从这两种模式中构建了一个平均图集,以说明这个小队列中厚度的变化。

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