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Microbiological profile and antimicrobial resistance among diabetic foot infections in Lebanon

机译:黎巴嫩糖尿病足部感染中的微生物概况和抗微生物抗性

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摘要

Diabetic Foot Infection (DFI) is a challenging complication of diabetes mellitus with a high burden in the Middle East where there is a marked increase in diabetes prevalence and complications. Early detection of DFI and the infectious organisms could result in the early initiation of appropriate antibiotic therapy and improved outcomes. DFI microbiological profiles differ between countries. In our region, Western guidelines are used when initiating treatment for DFI in the absence of local guidance. The purpose of our study was to determine the microbiologic profile and antimicrobial susceptibility of the DFI admissions at a large tertiary referral centre in Beirut and review other reported series in Lebanon and our region. This is a retrospective observational study of patients with DFI admitted to the American University of Beirut Medical Centre from January 2008 to June 2017. The bacteriologic isolation and antimicrobial susceptibility tests were performed according to standard microbiological methods. Between 2008 and 2017, 319 diabetic patients with DFU were admitted to AUBMC, and deep‐tissue cultures were taken for 179 patients. From 179 deep tissue cultures, 314 bacterial isolates were obtained. Fifty‐four percent of patients had the polymicrobial infection. Aerobic gram‐negative rods (GNR) were more prevalent than gram‐positive cocci (GPC) (55%, 39%, respectively). The most common isolate was Escherichia coli (15%) followed by Enterococcus (14%) and Pseudomonas aeruginosa (11%). Staphylococcus aureus isolates accounted for 9% with 50% of them being methicillin‐resistant (MRSA). Among Enterobacteriaceae, 37% of isolates were fluoroquinolone‐resistant, 25% were ESBL producers, and 2% were carbapenem‐resistant. Antibiotic resistance was significantly associated with prior usage of antibiotics. Anaerobes were isolated in 1% and Candida species in 5% of isolates. The sensitivity, specificity, PPV, and NPV of swab culture recovery of pathogens compared with deep tissue culture were (76%, 72%, 76%, 72%) and (94%, 81%, 91%, 86%) for gram‐positive and gram‐negative organisms, respectively. The microbiological profile of DFI in Lebanon is comparable to other countries in the MENA region with big differences compared with the West. Therefore, it is imperative to develop local guidelines for antimicrobial treatment. The high prevalence of GNR in DFI and the high fluoroquinolone resistance should be taken into consideration when choosing empiric antibiotics. Empiric treatment for MRSA or Pseudomonas does not appear necessary except for patients with specific risk factors.
机译:糖尿病足部感染(DFI)是糖尿病患者在中东负荷的挑战性,糖尿病患病率和并发症有明显增加。早期检测DFI和传染性生物可能导致适当的抗生素治疗的早期开始和改善的结果。 DFI微生物概况不同于国家之间。在我们的地区,在没有地方指导的情况下启动DFI的治疗时使用西方准则。我们研究的目的是确定贝鲁特大三级推荐中心的DFI招生的微生物概况和抗菌易感性,并在黎巴嫩和我们地区审查其他报告的系列。这是自2008年1月考入贝鲁特医学中心的美国大学2017年六月患者的DFI的回顾性观察研究细菌学分离及药敏试验,根据标准的微生物学方法进行。在2008年至2017年期间,319名患有DFU的糖尿病患者被占AUBMC,并为179名患者进行了深组织培养物。从179个深层组织培养物中获得314个细菌分离物。 54%的患者具有多种性感染。有氧革兰氏阴性棒(GNR)比克阳性COCC1(GPC)更普遍(分别为55%,39%)。最常见的分离物是大肠杆菌(15%),然后是肠球菌(14%)和假单胞菌铜绿假单胞菌(11%)。金黄色葡萄球菌分离物占9%,其中50%是耐甲氧脲(MRSA)。在肠杆菌菌中,37%的分离株是氟喹诺酮抗性,25%是ESBL生产者,2%是耐羧烯型。抗生素抗性显着与抗生素的使用显着相关。在5%的分离物中分离出1%和念珠菌种类的厌氧菌。与深层组织培养相比,奶油蛋白培养的敏感性,特异性,PPV和NPV培养(76%,72%,76%,72%)和(94%,81%,91%,86%)用于克 - 分别为革兰阴性生物。黎巴嫩DFI的微生物概况与梅纳地区的其他国家与西方相比具有巨大差异。因此,迫使发展抗菌治疗的当地指南。在选择经验抗生素时,应考虑到DFI中GNR的高患病率和高氟喹啉抗性。除了特定风险因素的患者外,MRSA或假单胞菌的仿真性不会出现必要。

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