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Complete mitochondrial genome sequence of Cicindela anchoralis Chevrolat 1845 (Coleoptera: Carabidae)

机译:完全线粒体基因组序列的Cicindela Anchoralis Chevrolat1845年(鞘翅目:Carabidae)

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摘要

The tiger beetle, Cicindela anchoralis Chevrolat, 1845 (Coleoptera: Carabidae), has been listed as an Endangered insect in South Korea. We sequenced the complete mitochondrial genome (mitogenome) of this organism (16,388 bp). The genome includes a typical set of genes (13 protein-coding genes (PCGs), 2 rRNA genes, and 22 tRNA genes) and 1 non-coding region with an arrangement identical to that observed in most insect genomes. Twelve PCGs had the typical ATN start codon, whereas ND1 had the atypical TTG codon. The AT-rich region is 1629-bp long, composed of 80.0% A + T nucleotides, and has no long repeat sequences. Phylogenetic analyses with concatenated sequences of the 13 PCGs and 2 rRNA genes, using the Bayesian inference (BI) method, placed C. anchoralis as a sister to the within-subfamilial species Habrodera capensis, with the highest nodal support presented by both BI and maximum likelihood (ML) methods. Three subfamilies represented by more than one species (Cicindelinae, Harpalinae, and Carabinae) were all determined by both BI and ML analyses to form strong monophyletic groups.
机译:虎甲虫,Cicindela anchoralis Chevrolat,1845(鞘翅目:步甲科),已被列为韩国的濒危昆虫。我们测序此有机体(16388 BP)的完整的线粒体基因组(线粒体基因)。该基因组包括一组典型的基因(13蛋白编码基因(个PCG),2个rRNA基因,以及22个tRNA基因)中并用的装置1组的非编码区相同,在大多数昆虫基因组观察。十二个PCG了典型的ATN起始密码子,而ND1有非典型TTG密码子。的富含AT的区域是1629碱基对长,80.0%A + T核苷酸组成,并且具有没有长的重复序列。与13个PCG和2个rRNA基因的级联序列,使用贝叶斯推断系统发生分析(BI)的方法,放置C. anchoralis作为姐姐到内-subfamilial物种Habrodera兔,与由两个BI和最大呈现最高节点支持似然(ML)方法。由多于一个物种(Cicindelinae,Harpalinae和Carabinae)表示的三个亚家族均通过两个BI确定和ML分析,以形成牢固的单系组。

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