GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes

摘要

The workflow of the GetOrganelle toolkit. The thumbnails inside data objects show an example of plastome assembly. The solid arrows denote the data processing flows and associated directions, with their width proportional to general computational burden. All green solid arrows together describe a complete run from reads to organelle genome(s), which is encapsulated in a single command using the script “get_organelle_from_reads.py”