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Inferring the Phylogenetic Positions of Two Fig Wasp Subfamilies of Epichrysomallinae and Sycophaginae Using Transcriptomes and Mitochondrial Data

机译:使用转录om和线粒体数据推断出两种无花果和Sycophaginae的两种无花果的系统发育位置

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摘要

Fig wasps are a group of insects (Hymenoptera: Chalcidoidea) that live in the compact syconia of fig trees (Moraceae: Ficus). Accurate classification and phylogenetic results are very important for studies of fig wasps, but the taxonomic statuses of some fig wasps, especially the non-pollinating subfamilies are difficult to determine, such as Epichrysomallinae and Sycophaginae. To resolve the taxonomic statuses of Epichrysomallinae and Sycophaginae, we obtained transcriptomes and mitochondrial genome (mitogenome) data for four species of fig wasps. These newly added data were combined with the data of 13 wasps (data on 11 fig wasp species were from our laboratory and two wasp species were download from NCBI). Based on the transcriptome and genome data, we obtained 145 single-copy orthologous (SCO) genes in 17 wasp species, and based on mitogenome data, we obtained 13 mitochondrial protein-coding genes (PCGs) for each of the 17 wasp species. Ultimately, we used 145 SCO genes, 13 mitochondrial PCGs and combined SCO genes and mitochondrial genes data to reconstruct the phylogenies of fig wasps using both maximum likelihood (ML) and Bayesian inference (BI) analyses. Our results suggest that both Epichrysomallinae and Sycophaginae are more closely related to Agaonidae with a high statistical support.
机译:无花果是一群昆虫(Hymenoptera:Chalcidoidea),其生活在无花果树的紧凑型倍核(Moraceae:Ficus)中。精确的分类和系统发育结果对于无花果的研究非常重要,但是一些无花果的分类状态,特别是非授粉的亚属植物难以确定,例如Epichrysomallinae和Sycophaginae。为了解决ePichrysomallinae和Sycophaginae的分类状态,我们获得了四种物种的转录瘤和线粒体基因组(促滤皮组)数据。这些新添加的数据与13只黄蜂的数据相结合(11个有关的数据,来自我们的实验室,两种黄蜂物种从NCBI下载)。基于转录组和基因组数据,我们在17只黄蜂物种中获得145个单拷贝正非(SCO)基因,并基于促滤蛋白数据,为13种WASP物种中的每一个获得13种线粒体蛋白质编码基因(PCG)。最终,我们使用了145个SCO基因,13个线粒体PCG和组合的SCO基因和线粒体基因数据来使用最大可能性(ML)和贝叶斯推理(BI)分析来重建图13的紫外线的系统。我们的研究结果表明,Epichrysomallinae和Sycophaginae都与Agaonidae密切相关,具有高统计支持。

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