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An assessment of sampling designs using SCR analyses to estimate abundance of boreal caribou

机译:使用SCR分析对抽样设计进行评估以估算Boreal Caribou的丰富

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摘要

Accurately estimating abundance is a critical component of monitoring and recovery of rare and elusive species. Spatial capture–recapture (SCR) models are an increasingly popular method for robust estimation of ecological parameters. We provide an analytical framework to assess results from empirical studies to inform SCR sampling design, using both simulated and empirical data from noninvasive genetic sampling of seven boreal caribou populations (Rangifer tarandus caribou), which varied in range size and estimated population density. We use simulated population data with varying levels of clustered distributions to quantify the impact of nonindependence of detections on density estimates, and empirical datasets to explore the influence of varied sampling intensity on the relative bias and precision of density estimates. Simulations revealed that clustered distributions of detections did not significantly impact relative bias or precision of density estimates. The genotyping success rate of our empirical dataset (n = 7,210 samples) was 95.1%, and 1,755 unique individuals were identified. Analysis of the empirical data indicated that reduced sampling intensity had a greater impact on density estimates in smaller ranges. The number of captures and spatial recaptures was strongly correlated with precision, but not absolute relative bias. The best sampling designs did not differ with estimated population density but differed between large and small ranges. We provide an efficient framework implemented in R to estimate the detection parameters required when designing SCR studies. The framework can be used when designing a monitoring program to minimize effort and cost while maximizing effectiveness, which is critical for informing wildlife management and conservation.
机译:准确估算丰度是监测和恢复稀有和难以捉摸的物种的关键组成部分。空间捕获 - 重新捕获(SCR)模型是一种越来越多的生态参数估计的方法。我们提供了分析框架,以评估实证研究的结果,以通知SCR采样设计,使用来自七个北部北北北北北北北北北北北北北北北北北北角群岛的非侵入性遗传采样的模拟和经验数据,这在范围大小和估计人口密度中变化。我们使用具有不同级别的集群分布级别的模拟人口数据,以量化未依赖的检测对密度估计的影响以及经验数据集,以探讨各种采样强度对密度估计的相对偏差和精度的影响。模拟显示,群集的检测分布没有显着影响密度估计的相对偏差或精度。我们的经验数据集(n = 7,210个样本)的基因分型成功率为95.1%,鉴定了1,755个独特的个体。对经验数据的分析表明,降低的采样强度对小范围内的密度估计产生了更大的影响。捕获数和空间返回的数量与精度强烈相关,但不是绝对相对偏差。最好的采样设计与估计人口密度没有不同,但在大型和小范围之间不同。我们提供了在R中实现的有效框架来估计在设计SCR研究时所需的检测参数。在设计监控程序时,框架可以使用,以最大限度地减少努力和成本,同时最大限度地提高有效性,这对于通知野生动物管理和保护至关重要。

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