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Micro‐morphological feature visualization auto‐classification and evolution quantitative analysis of tumors by using SR‐PCT

机译:微晶特征可视化自动分类和使用SR-PCT对肿瘤的演化定量分析

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摘要

Tissue micro‐morphological abnormalities and interrelated quantitative data can provide immediate evidences for tumorigenesis and metastasis in microenvironment. However, the multiscale three‐dimensional nondestructive pathological visualization, measurement, and quantitative analysis are still a challenging for the medical imaging and diagnosis. In this work, we employed the synchrotron‐based X‐ray phase‐contrast tomography (SR‐PCT) combined with phase‐and‐attenuation duality phase retrieval to reconstruct and extract the volumetric inner‐structural characteristics of tumors in digesting system, helpful for tumor typing and statistic calculation of different tumor specimens. On the basis of the feature set including eight types of tumor micro‐lesions presented by our SR‐PCT reconstruction with high density resolution, the AlexNet‐based deep convolutional neural network model was trained and obtained the 94.21% of average accuracy of auto‐classification for the eight types of tumors in digesting system. The micro‐pathomophological relationship of liver tumor angiogenesis and progression were revealed by quantitatively analyzing the microscopic changes of texture and grayscale features screened by a machine learning method of area under curve and principal component analysis. The results showed the specific path and clinical manifestations of tumor evolution and indicated that these progressions of tumor lesions rely on its inflammation microenvironment. Hence, this high phase‐contrast 3D pathological characteristics and automatic analysis methods exhibited excellent recognizable and classifiable for micro tumor lesions.
机译:组织微形态异常和相互关联的定量数据可以立即可以证明微环境中的肿瘤内酯和转移。然而,多尺度三维无损病理可视化,测量和定量分析仍然是医学成像和诊​​断的具有挑战性。在这项工作中,我们采用了基于同步的X射线相位对比断层扫描(SR-PCT)与相位和衰减的二元相位检索结合,以在消化系统中重建和提取肿瘤的体积内结构特征,有助于不同肿瘤标本的肿瘤键入和统计计算。在该特征集的基础上,包括我们的SR-PCT重建具有高密度分辨率的八种类型的肿瘤微病变,培训了基于亚历网的深度卷积神经网络模型,并获得了自动分类的平均精度的94.21%用于消化系统中的八种类型的肿瘤。通过定量分析曲线和主要成分分析的机器学习方法筛选的纹理和灰度特征的微观变化,揭示了肝肿瘤血管生成和进展的微量病理学神经病理学关系。结果表明,肿瘤演化的具体路径和临床表现,并表明肿瘤病变的这些进展依赖于其炎症微环境。因此,这种高相位对比度3D病理特性和自动分析方法对微肿瘤病变表现出优异的可识别和分类。

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