WeFaceNano: a user-friendly pipeline for complete ONT sequence assembly and detection of antibiotic resistance in multi-plasmid bacterial isolates

摘要

The WeFaceNano interface showing the available workflow tools and settings. Within the interface, the input folder containing the raw sequence data and output folder can be selected. There is a choice between two assemblers, including a selection for assembly settings when the Flye assembler is chosen. An estimated genome size has to be given, and there are options to do BLAST or ResFinder analysis with the possibility to provide desirable settings