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Differential detection of turkey coronavirus infectious bronchitis virus and bovine coronavirus by a multiplex polymerase chain reaction

机译:通过多重聚合酶链反应鉴别火鸡冠状病毒传染性支气管炎病毒和牛冠状病毒

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摘要

The objective of the present study was to develop a multiplex polymerase chain reaction (PCR) method for differential detection of turkey coronavirus (TCoV), infectious bronchitis coronavirus (IBV), and bovine coronavirus (BCoV). Primers were designed from conserved or variable regions of nucleocapsid (N) or spike (S) protein gene among TCoV, IBV, and BCoV and used in the same PCR reaction. Reverse transcription followed by the PCR reaction was used to amplify a portion of N or S gene of the corresponding coronaviruses. The PCR products were detected on agarose gel stained with ethidium bromide. Two PCR products, a 356-bp band corresponding to N gene and a 727-bp band corresponding to S gene, were obtained for TCoV isolates. In contrast, one PCR product of 356 bp corresponding to a fragment of N gene was obtained for IBV strains and one PCR product of 568 bp corresponding to a fragment of S gene was obtained for BCoV. There were no PCR products with the same primers for Newcastle disease virus, Marek's disease virus, turkey pox virus, pigeon pox virus, fowl pox virus, reovirus, infectious bursal disease virus, enterovirus, astrovirus, , , and . Performance of the assay with serially diluted RNA demonstrated that the multiplex PCR could detect 4.8 × 10  μg of TCoV RNA, 4.6 × 10  μg of IBV RNA, and 8.0 × 10  μg of BCoV RNA. These results indicated that the multiplex PCR as established in the present study is a rapid, sensitive, and specific method for differential detection of TCoV, IBV, and BCoV in a single PCR reaction.
机译:本研究的目的是开发一种用于鉴别检测火鸡冠状病毒(TCoV),传染性支气管炎冠状病毒(IBV)和牛冠状病毒(BCoV)的多重聚合酶链反应(PCR)方法。从TCoV,IBV和BCoV之间的核衣壳(N)或刺突(S)蛋白基因的保守或可变区设计引物,并用于同一PCR反应中。反转录,然后进行PCR反应,用于扩增相应冠状病毒的N或S基因的一部分。在用溴乙锭染色的琼脂糖凝胶上检测PCR产物。对于TCoV分离株,获得了两种PCR产物,分别对应于N基因的356 bp条带和对应于S基因的727 bp条带。相比之下,对于IBV菌株,获得了一个与N基因片段相对应的356 bp的PCR产物,对于BCoV获得了一个与S基因的片段相对应的568 bp的PCR产物。没有针对纽卡斯尔病病毒,马立克氏病病毒,火鸡痘病毒,鸽痘病毒,禽痘病毒,呼肠孤病毒,传染性法氏囊病病毒,肠病毒,星状病毒和的引物相同的PCR产物。用连续稀释的RNA进行分析的性能表明,多重PCR可以检测到4.8×10μg的TCoV RNA,4.6×10μg的IBV RNA和8.0×10μg的BCoV RNA。这些结果表明,在本研究中建立的多重PCR是一种在单个PCR反应中差异检测TCoV,IBV和BCoV的快速,灵敏和特异的方法。

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