A de novo reference transcriptome for Bolitoglossa vallecula an Andean mountain salamander in Colombia

摘要

The amphibian order Caudata, contains several important model species for biological research. However, there is need to generate transcriptome data from representative species of the primary salamander families. Here we describe a reference transcriptome for a terrestrial salamander, (Caudata: Plethodontidae). We employed paired-end (PE) illumina RNA sequencing to assemble a reference transcriptome for . Assembled transcripts were compared against sequences from other vertebrate taxa to identify orthologous genes, and compared to the transcriptome of a close plethodontid relative ( ) to identify commonly expressed genes in the skin. This dataset should be useful to future comparative studies aimed at understanding important biological process, such as immunity, wound healing, and the production of antimicrobial compounds.