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Two Novel Real-Time Reverse Transcriptase PCR Assays for Rapid Detection of Bacterial Contamination in Platelet Concentrates

机译:快速检测血小板浓缩液中细菌污染的两种新型实时逆转录酶PCR检测方法

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摘要

The incidence of platelet bacterial contamination is approximately 1 per 2,000 units and has been acknowledged as the most frequent infectious risk from transfusion. In preliminary studies, the sterility of platelet concentrates (PCs) was tested with an automated bacterial blood culturing system and molecular genetic assays. Two real-time reverse transcriptase PCR (RT-PCR) assays performed in a LightCycler instrument were developed and compared regarding specificity and sensitivity by the use of different templates to detect the majority of the clinically important bacterial species in platelets. Primers and probes specific for the conserved regions of the eubacterial 23S rRNA gene or the groEL gene (encoding the 60-kDa heat shock protein Hsp60) were designed. During the development of the 23S rRNA RT-PCR, problems caused by the contamination of reagents with bacterial DNA were noted. Treatment with 8-methoxypsoralen and UV irradiation reduced the level of contaminating DNA. The sensitivity of the assays was greatly influenced by the enzyme system which was used. With rTth DNA polymerase in a one-enzyme system, we detected 500 CFU of Escherichia coli or Staphylococcus epidermidis/ml. With a two-enzyme system consisting of Moloney murine leukemia virus RT and Taq DNA polymerase, we detected 16 CFU/ml. With groEL mRNA as the target of RT-PCR under optimized conditions, we detected 125 CFU of E. coli/ml, and no problems with false-positive results caused by reagent contamination or a cross-reaction with human nucleic acids were found. Furthermore, the use of mRNA as an indicator of viability was demonstrated. Here we report the application of novel real-time RT-PCR assays for the detection of bacterial contamination of PCs that are appropriate for transfusion services.
机译:血小板细菌污染的发生率约为每2,000个单位1个,已被认为是输血中最常见的感染风险。在初步研究中,浓缩血小板(PCs)的无菌性是通过自动细菌血液培养系统和分子遗传学检测方法进行的。开发了在LightCycler仪器中进行的两种实时逆转录酶PCR(RT-PCR)分析,并通过使用不同的模板检测血小板中大多数临床上重要的细菌种类,比较了特异性和敏感性。设计了对真细菌23S rRNA基因或groEL基因(编码60 kDa热激蛋白Hsp60)的保守区域具有特异性的引物和探针。在开发23S rRNA RT-PCR的过程中,注意到试剂被细菌DNA污染所引起的问题。用8-甲氧基补骨脂素和紫外线辐射处理可以减少污染DNA的水平。测定的灵敏度受到所用酶系统的极大影响。在一个酶系统中使用rTth DNA聚合酶,我们检测到500 CFU的大肠杆菌或表皮葡萄球菌/ ml。使用由莫洛尼氏鼠白血病病毒RT和Taq DNA聚合酶组成的两种酶系统,我们检测到16 CFU / ml。在优化条件下,以groEL mRNA作为RT-PCR的靶标,我们检测到了125 CFU的大肠杆菌/ ml,未发现因试剂污染或与人核酸的交叉反应而导致假阳性结果的问题。此外,证明了使用mRNA作为生存力的指标。在这里,我们报告了新颖的实时RT-PCR测定法在检测适用于输血服务的PC的细菌污染中的应用。

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