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The phenotypic variations of multi-locus imprinting disturbances associated with maternal-effect variants of NLRP5 range from overt imprinting disorder to apparently healthy phenotype

机译:与NLRP5母体效应变异相关的多位点印迹障碍的表型变异从明显的印迹障碍到明显健康的表型

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摘要

Novel variants in a familial case of MLID with phenotypically discordant siblings. Domain structure of human NLRP5 depicting the position of known variants [ , , ], along with the two novel variants described in the present study (indicated by red circles). Family pedigree and corresponding NLRP5 mutations. Black-filled symbols represent individuals with evident BWS features: proband (III-1) and fetus with omphalocele. Carriers of variants are indicated by symbols with central dot (red in case of maternal carriers). Weeks of gestation are indicated for the four aborted fetuses. Boxplot showing DNA methylation analysis of four maternal gDMRs ( , , GNAS, and ) and one paternal gDMR ( ), as measured by bisulphite pyrosequencing in three different tissue types. Primers used in PCR and sequencing have been checked for specificity of the assay. For each region, 6-12 CpGs have been tested and distribution of their percentage of methylation has been represented as boxplot. Data are a mean between at least two independent PCR and pyrosequencing experiments. Controls include 4–6 normal individuals. values have been calculated by two-tailed Student’s test (* ≤ 0.05; ** ≤ 0.01; *** ≤ 0.001; **** ≤ 0.0001). Validation of variants by Sanger sequencing and their segregation in the family. Variants are highlighted with a blue-shaded stripe and their genomic positions are indicated below the chromatogram (chr19, GRCh37/hg19). Note that the maternal grandmother (I-2) was heterozygous for the missense variant while the mother (II-2) was compound heterozygous for both the missense and nonsense variants
机译:MLID家族病例中具有表型不一致的同胞的新型变体。人NLRP5的结构域结构描述了已知变体[,]的位置,以及本研究中描述的两个新变体(用红色圆圈表示)。家族谱系和相应的NLRP5突变。黑色填充符号表示具有明显BWS特征的个体:先证者(III-1)和胎儿有食道膨出。变体的携带者用带中心点的符号表示(母亲携带者为红色)。显示了四个流产胎儿的妊娠周数。箱形图显示了四种母体gDMR(,,GNAS和)和一种母体gDMR()的DNA甲基化分析,通过亚硫酸氢盐焦磷酸测序法在三种不同的组织类型中进行了测量。 PCR和测序中使用的引物已检查了测定的特异性。对于每个区域,已经测试了6-12个CpG,其甲基化百分比的分布已表示为箱线图。数据是至少两个独立的PCR和焦磷酸测序实验之间的平均值。对照包括4-6名正常个体。值是通过两尾学生测验(*≤0.05; **≤0.01; ***≤0.001; ****≤0.0001)计算得出的。通过Sanger测序验证变体及其在家庭中的分离。变体以蓝色阴影突出显示,其基因组位置在色谱图下方显示(chr19,GRCh37 / hg19)。请注意,外婆(I-2)对于错义变体是杂合的,而母亲(II-2)对于错义和无义变体都是复合杂合的

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