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Extraintestinal Salmonellosis in a General Hospital (1991 to 1996): Relationships between Salmonella Genomic Groups and Clinical Presentations

机译:综合医院的肠外沙门氏菌病(1991年至1996年):沙门氏菌基因组与临床表现之间的关系

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摘要

Episodes of extraintestinal salmonellosis treated at a general hospital (1,522 beds) over a 6-year period (1991 to 1996) were characterized by the analysis of phenotypic and genotypic traits of Salmonella organisms and clinical data from medical reports. Extraintestinal salmonellosis accounted for 8% of all salmonellosis episodes. Fifty-two medical reports, dealing with 6 cases of typhoid fever, 32 cases of bacteremia, and 14 focal infections, were reviewed. All cases of typhoid fever except 1, 7 cases of bacteremia, and 5 focal infections were not related to any underlying disease or predisposing factors, while 25 cases of bacteremia and 9 focal infections were associated with some of these risk factors. All typhoid isolates and 65.4% of the nontyphoid isolates were susceptible to antimicrobials. Fifty-one nontyphoid strains were analyzed and assigned to 21 genomic groups, which were defined by serotype, combined ribotype, and combined randomly amplified polymorphic DNA type (each genomic group could include organisms differing in some phenotypic traits). The relationships between genomic groups and clinical presentations were traced. Organisms causing 22 episodes (17 episodes of bacteremia, 2 of pneumonia, 1 of peritonitis, 1 of pyelonephritis, and 1 of cystitis) belonged to a prevalent Salmonella enterica serotype Enteritidis genomic group, which included organisms assigned to four phage types, five biotypes, and four resistance patterns, causing infections in patients with and without risk factors. Seven other genomic groups, 4 Enteritidis groups (associated with both bacteremia and focal infections), 2 Typhimurium groups (one associated with bacteremia and the other with focal infections) and 1 Brandenburg group (associated with bacteremia) included two or more strains, and the remaining 13 genomic groups consisted of only one strain each.
机译:通过对沙门氏菌生物的表型和基因型特征分析以及医学报告的临床数据来表征在一家综合医院(1991年至1996年)治疗的肠外沙门氏菌病发作(在6年间(1991年至1996年)中)。肠外沙门氏菌病占所有沙门氏菌病发作的8%。回顾了52篇医学报告,涉及6例伤寒,32例菌血症和14例局灶性感染。除1例,7例菌血症和5例局灶性感染外,所有伤寒病例均与任何潜在疾病或诱发因素无关,而25例菌血症和9例局灶性感染与其中某些危险因素相关。所有伤寒分离株和65.4%的非伤寒分离株均对抗菌药物敏感。分析了51株非伤寒菌株,并将其分为21个基因组,分别由血清型,组合核糖型和组合随机扩增的多态性DNA类型定义(每个基因组可包括在某些表型性状上不同的生物)。追踪基因组与临床表现之间的关系。引起22次发作的细菌(17次菌血症,2例肺炎,1例腹膜炎,1例肾盂肾炎和1例膀胱炎)属于普遍存在的肠炎沙门氏菌血清型肠炎沙门氏菌基因组,其中包括被归类为四种噬菌体,五种生物型,四种耐药模式,在有和没有危险因素的患者中引起感染。其他七个基因组组,四个肠炎菌组(与菌血症和局灶性感染相关),2个鼠伤寒组(一个与菌血症相关,另一个与局灶性感染相关)和1个勃兰登堡组(与菌血症相关)包括两个或多个菌株。其余的13个基因组分别由一个菌株组成。

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