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Contribution of a typing method based on IS256 probing of SmaI-digested cellular DNA to discrimination of European phage type 77 methicillin-resistant Staphylococcus aureus strains.

机译:基于IS256探测SmaI消化的细胞DNA的分型方法对欧洲噬菌体耐药性77型耐甲氧西林金黄色葡萄球菌菌株的鉴别的贡献。

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摘要

The incidence of infections with phage type 77 methicillin-resistant Staphylococcus aureus (MRSA) strains increased in France in 1987. These strains are widespread in numerous European hospitals. The SmaI restriction profiles of total DNA extracted from 74 phage type 77 MRSA strains isolated from 1987 to 1994 in 10 hospitals in eight European cities (in France, Belgium, and Spain) were analyzed. Hybridization with a probe containing a 468-bp DNA fragment from within the transposase gene of the insertion sequence IS256 was also examined. Forty-three SmaI profiles were detected. Twenty major genotypes were identified, and each genotype contained strains with the same profile or profiles which differed by no more than three bands. Strains isolated in different countries and at several-year intervals were often grouped within the same genotype. A larger number of genotypes could be discriminated by analysis of the patterns of hybridization with the IS256 probe. SmaI restriction fragments with the same apparent electrophoretic mobility could, in some cases, be distinguished by the presence or the absence of nucleotide sequences hybridizing with IS256. The strains that grouped within the same genotype after hybridization with IS256 were mostly those isolated in the same hospital and at less than 12-month intervals. Consequently, the IS256 probe that we used improved restriction profile analysis for discrimination between the intrahospital, outbreak-related phage type 77 MRSA strains and the endemic strains disseminated in various cities and countries.
机译:1987年在法国,噬菌体耐药性77型耐甲氧西林金黄色葡萄球菌(MRSA)菌株的感染率有所上升。这些菌株在许多欧洲医院中广泛传播。分析了从1987年至1994年在8个欧洲城市(法国,比利时和西班牙)的10家医院中分离的74种噬菌体77型MRSA菌株提取的总DNA的SmaI限制性酶切谱。还检查了与含有来自插入序列IS256的转座酶基因内的468bp DNA片段的探针的杂交。检测到43个SmaI配置文件。鉴定出二十种主要基因型,每种基因型包含具有相同谱或相差不超过三个谱带的菌株。在不同国家/地区和几年间隔分离出的菌株通常归为同一基因型。通过与IS256探针杂交的模式分析,可以区分出更多的基因型。在某些情况下,具有相同表观电泳迁移率的SmaI限制性片段可以通过与IS256杂交的核苷酸序列的存在与否来区分。与IS256杂交后,属于同一基因型的菌株大多是在同一家医院分离的菌株,间隔不到12个月。因此,我们使用改进的限制谱分析的IS256探针对医院内与暴发相关的噬菌体77型MRSA菌株与在各个城市和国家传播的地方性菌株进行了区分。

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