Combined Use of Residual Dipolar Couplings and Solution X-ray Scattering to Rapidly Probe Rigid Body Conformational Transitions in a Non-Phosphorylatable Active Site Mutant of the 128 kDa Enzyme I Dimer

摘要

The first component of the bacterial phosphotransferase system, enzyme I (EI), is a multidomain 128 kDa dimer that undergoes large rigid body conformational transitions during the course of its catalytic cycle. Here we investigate the solution structure of a non-phosphorylatable active site mutant in which the active site histidine is substituted by glutamine. We show that perturbations in the relative orientations and positions of the domains and subdomains can be rapidly and reliably determined by conjoined rigid body/torsion angle/Cartesian simulated annealing calculations driven by orientational restraints from residual dipolar couplings and shape and translation information afforded by small and wide angle X-ray scattering. Although histidine and glutamine are isosteric, the conformational space available to a Gln side chain is larger than that for the imidazole ring of His. An additional hydrogen bond between the side chain of Gln189 located on the EIN^α/β subdomain and an aspartate (Asp129) on the EIN^α subdomain results in a small (~9°) reorientation of the EIN^α and EIN^α/β subdomains that is in turn propagated to a larger reorientation (~26°) of the EIN domain relative to the EIC dimerization domain, illustrating the positional sensitivity of the EIN domain and its constituent subdomains to small structural perturbations.