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Accounting for Age Uncertainty in Growth Modeling the Case Study of Yellowfin Tuna (Thunnus albacares) of the Indian Ocean

机译:在生长模型中考虑年龄不确定性以印度洋黄鳍金枪鱼(Thunnus albacares)为例

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摘要

Age estimates, typically determined by counting periodic growth increments in calcified structures of vertebrates, are the basis of population dynamics models used for managing exploited or threatened species. In fisheries research, the use of otolith growth rings as an indicator of fish age has increased considerably in recent decades. However, otolith readings include various sources of uncertainty. Current ageing methods, which converts an average count of rings into age, only provide periodic age estimates in which the range of uncertainty is fully ignored. In this study, we describe a hierarchical model for estimating individual ages from repeated otolith readings. The model was developed within a Bayesian framework to explicitly represent the sources of uncertainty associated with age estimation, to allow for individual variations and to include knowledge on parameters from expertise. The performance of the proposed model was examined through simulations, and then it was coupled to a two-stanza somatic growth model to evaluate the impact of the age estimation method on the age composition of commercial fisheries catches. We illustrate our approach using the saggital otoliths of yellowfin tuna of the Indian Ocean collected through large-scale mark-recapture experiments. The simulation performance suggested that the ageing error model was able to estimate the ageing biases and provide accurate age estimates, regardless of the age of the fish. Coupled with the growth model, this approach appeared suitable for modeling the growth of Indian Ocean yellowfin and is consistent with findings of previous studies. The simulations showed that the choice of the ageing method can strongly affect growth estimates with subsequent implications for age-structured data used as inputs for population models. Finally, our modeling approach revealed particularly useful to reflect uncertainty around age estimates into the process of growth estimation and it can be applied to any study relying on age estimation.
机译:年龄估计通常是通过计算脊椎动物钙化结构中周期性增长的增量来确定的,是用于管理受开发或受威胁物种的种群动态模型的基础。在渔业研究中,近几十年来使用耳石生长环作为鱼类年龄的指标已大大增加。但是,耳石的读数包括各种不确定性来源。当前的将环的平均数量转换为年龄的老化方法仅提供定期的年龄估算,其中不确定性的范围被完全忽略。在这项研究中,我们描述了一种分层模型,用于根据重复的耳石读物来估计个体年龄。该模型是在贝叶斯框架内开发的,用于明确表示与年龄估算相关的不确定性来源,以允许个体差异并包括来自专业知识的参数知识。通过模拟检查了提出的模型的性能,然后将其与两节体细胞生长模型耦合,以评估年龄估算方法对商业渔场年龄构成的影响。我们通过大规模的标记捕获实验收集到的印度洋黄鳍金枪鱼的矢状耳石来说明我们的方法。仿真性能表明,不管鱼的年龄如何,老化误差模型都能够估计老化偏差并提供准确的年龄估计。结合生长模型,这种方法似乎适合模拟印度洋黄鳍金枪鱼的生长,并且与先前的研究结果一致。模拟表明,老化方法的选择会严重影响增长估计,并对用作人口模型输入的年龄结构化数据产生后续影响。最后,我们的建模方法揭示了将年龄估计的不确定性反映到增长估计过程中特别有用,并且可以应用于依赖年龄估计的任何研究。

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