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Biogeography of Deep-Sea Benthic Bacteria at Regional Scale (LTER HAUSGARTEN Fram Strait Arctic)

机译:区域尺度的深海底栖细菌的生物地理学(LTER HAUSGARTENFram海峡北极)

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摘要

Knowledge on spatial scales of the distribution of deep-sea life is still sparse, but highly relevant to the understanding of dispersal, habitat ranges and ecological processes. We examined regional spatial distribution patterns of the benthic bacterial community and covarying environmental parameters such as water depth, biomass and energy availability at the Arctic Long-Term Ecological Research (LTER) site HAUSGARTEN (Eastern Fram Strait). Samples from 13 stations were retrieved from a bathymetric (1,284–3,535 m water depth, 54 km in length) and a latitudinal transect (∼ 2,500 m water depth; 123 km in length). 454 massively parallel tag sequencing (MPTS) and automated ribosomal intergenic spacer analysis (ARISA) were combined to describe both abundant and rare types shaping the bacterial community. This spatial sampling scheme allowed detection of up to 99% of the estimated richness on phylum and class levels. At the resolution of operational taxonomic units (97% sequence identity; OTU3%) only 36% of the Chao1 estimated richness was recovered, indicating a high diversity, mostly due to rare types (62% of all OTU3%). Accordingly, a high turnover of the bacterial community was also observed between any two sampling stations (average replacement of 79% of OTU3%), yet no direct correlation with spatial distance was observed within the region. Bacterial community composition and structure differed significantly with increasing water depth along the bathymetric transect. The relative sequence abundance of Verrucomicrobia and Planctomycetes decreased significantly with water depth, and that of Deferribacteres increased. Energy availability, estimated from phytodetrital pigment concentrations in the sediments, partly explained the variation in community structure. Overall, this study indicates a high proportion of unique bacterial types on relatively small spatial scales (tens of kilometers), and supports the sampling design of the LTER site HAUSGARTEN to study bacterial community shifts in this rapidly changing area of the world’s oceans.
机译:关于深海生物分布的空间尺度的知识仍然很少,但是与对扩散,生境范围和生态过程的理解高度相关。我们在北极长期生态研究(LTER)站点HAUSGARTEN(东部弗拉姆海峡)考察了底栖细菌群落的区域空间分布格局以及诸如水深,生物量和能源利用率等各种环境参数。从测深仪(水深1,284–3,535 m,长度54 km)和纬度横断面(水深约2500 m;长度123 km)中检索了13个站点的样本。 454个大规模平行标签测序(MPTS)和自动核糖体基因间隔分析(ARISA)结合使用,描述了形成细菌群落的丰富和稀有类型。这种空间采样方案最多可检测出门和类级别的估计丰富度的99%。在操作分类单位的解析度(97%序列同一性; OTU3%)下,仅回收了Chao1估计的丰富度的36%,表明多样性很高,主要是由于稀有类型(占所有OTU3%的62%)。因此,在任何两个采样站之间还观察到细菌群落的高周转率(平均替换为OTU3%的79%),但在该区域内未观察到与空间距离​​的直接相关性。随着沿测深断面水深的增加,细菌群落的组成和结构显着不同。 Verrucomicrobia和Planctomycetes的相对序列丰度随着水深的增加而显着降低,而Deferribacteres的相对丰度则增加。根据沉积物中植物碎屑色素的浓度估算的能量可用性部分解释了群落结构的变化。总的来说,这项研究表明在相对较小的空间尺度(数十公里)上,很大比例的独特细菌类型,并支持LTER站点HAUSGARTEN的抽样设计,以研究世界海洋这个迅速变化的地区中细菌群落的变化。

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