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Effect of microfibril twisting on theoretical powder diffraction patterns of cellulose Iβ

机译:微原纤捻对纤维素Iβ理论粉末衍射图的影响

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摘要

Previous studies of calculated diffraction patterns for cellulose crystallites suggest that distortions that arise once models have been subjected to MD simulation are the result of both microfibril twisting and changes in unit cell dimensions induced by the empirical force field; to date, it has not been possible to separate the individual contributions of these effects. To provide a better understanding of how twisting manifests in diffraction data, the present study demonstrates a method for generating twisted and linear cellulose structures that can be compared without the bias of dimensional changes, allowing assessment of the impact of twisting alone. Analysis of unit cell dimensions, microfibril volume, hydrogen bond patterns, glycosidic torsion angles, and hydroxymethyl group orientations confirmed that the twisted and linear structures collected with this method were internally consistent, and theoretical powder diffraction patterns for the two were shown to be effectively indistinguishable. These results indicate that differences between calculated patterns for the crystal coordinates and twisted structures from MD simulation can result entirely from changes in unit cell dimensions, and not from microfibril twisting alone. Although powder diffraction patterns for models in the 81-chain size regime were shown to be unaffected by twisting, suggesting that a modest degree of twist is not inconsistent with experimental data, it may be that other diffraction techniques are capable of detecting this structural difference. Until such time as definitive experimental evidence comes to light, the results of this study suggest that both twisted and linear microfibrils may represent an appropriate model for cellulose Iβ.
机译:先前对纤维素微晶衍射图的计算研究表明,一旦对模型进行了MD模拟,就会产生扭曲,这是微纤维扭曲和经验力场引起的晶胞尺寸变化的结果。迄今为止,尚不可能将这些影响的单独贡献区分开。为了更好地理解扭曲在衍射数据中的表现方式,本研究演示了一种生成扭曲和线性纤维素结构的方法,该方法可以在没有尺寸变化偏差的情况下进行比较,从而可以单独评估扭曲的影响。分析晶胞尺寸,微纤丝体积,氢键模式,糖苷扭转角和羟甲基方向,证实了用这种方法收集的扭曲和线性结构在内部是一致的,并且这两种理论粉末粉末衍射图显示出有效的区别。 。这些结果表明,由MD模拟得到的晶体坐标和扭曲结构的计算图案之间的差异完全可以由晶胞尺寸的变化引起,而不是仅由微原纤维的扭曲引起。尽管显示在81链大小范围内的模型的粉末衍射图样不受扭曲影响,表明适度的扭曲度与实验数据并不矛盾,但可能其他衍射技术也能够检测到这种结构差异。直到有明确的实验证据出现之前,这项研究的结果表明,扭曲的和线性的微纤维都可以代表纤维素Iβ的合适模型。

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