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Ensuring privacy in the study of pathogen genetics

机译:在病原体遗传学研究中确保隐私

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摘要

Rapid growth in the genetic sequencing of pathogens in recent years has led to the creation of large sequence databases. This aggregated sequence data can be very useful for tracking and predicting epidemics of infectious diseases. However, the balance between the potential public health benefit and the risk to personal privacy for individuals whose genetic data (personal or pathogen) are included in such work has been difficult to delineate, because neither the true benefit nor the actual risk to participants has been adequately defined. Existing approaches to minimise the risk of privacy loss to participants are based on de-identification of data by removal of a predefined set of identifiers. These approaches neither guarantee privacy nor protect the usefulness of the data. We propose a new approach to privacy protection that will quantify the risk to participants, while still maximising the usefulness of the data to researchers. This emerging standard in privacy protection and disclosure control, which is known as differential privacy, uses a process-driven rather than data-centred approach to protecting privacy.
机译:近年来,病原体的基因测序迅速增长,导致建立了大型序列数据库。这种汇总的序列数据对于跟踪和预测传染病的流行非常有用。但是,很难确定遗传数据(个人或病原体)包含在此类工作中的个人在潜在的公共卫生利益和个人隐私风险之间的平衡,因为对参与者的真正利益和实际风险都没有充分定义。使参与者的隐私丢失风险最小化的现有方法是基于通过去除预定义的标识符集合来对数据进行去识别。这些方法既不能保证隐私也不保护数据的有用性。我们提出了一种新的隐私保护方法,该方法将量化参与者的风险,同时仍将数据对研究人员的有用性最大化。隐私保护和披露控制方面的这一新兴标准(称为差异隐私)使用过程驱动而非数据中心的方法来保护隐私。

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