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Quadratic Blind Linear Unmixing: A Graphical User Interface for Tissue Characterization

机译:二次盲线性分解:用于组织表征的图形用户界面

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摘要

Spectral unmixing is the process of breaking down data from a sample into its basic components and their abundances. Previous work has been focused on blind unmixing of multi-spectral fluorescence lifetime imaging microscopy (m-FLIM) datasets under a linear mixture model and quadratic approximations. This method provides a fast linear decomposition and can work without a limitation in the maximum number of components or end-members. Hence this work presents an interactive software which implements our blind end-member and abundance extraction (BEAE) and quadratic blind linear unmixing (QBLU) algorithms in Matlab. The options and capabilities of our proposed software are described in detail. When the number of components is known, our software can estimate the constitutive end-members and their abundances. When no prior knowledge is available, the software can provide a completely blind solution to estimate the number of components, the end-members and their abundances. The characterization of three case studies validates the performance of the new software: ex-vivo human coronary arteries, human breast cancer cell samples, and in-vivo hamster oral mucosa. The software is freely available in a hosted webpage by one of the developing institutions, and allows the user a quick, easy-to-use and efficient tool for multi/hyper-spectral data decomposition.
机译:频谱分解是将样本中的数据分解成其基本成分及其丰度的过程。以前的工作集中在线性混合模型和二次近似下的多光谱荧光寿命成像显微镜(m-FLIM)数据集的盲分解。该方法提供了快速的线性分解,并且可以在不限制组件或末端成员的最大数量的情况下工作。因此,这项工作提出了一个交互式软件,该软件在Matlab中实现了我们的盲端成员和丰度提取(BEAE)和二次盲线性解混(QBLU)算法。详细介绍了我们建议的软件的选项和功能。当组件的数量已知时,我们的软件可以估算出组成端成员及其丰度。如果没有可用的先验知识,该软件可以提供一种完全盲目的解决方案,以估计组件的数量,最终成员及其数量。三个案例研究的特征验证了该新软件的性能:离体人类冠状动脉,人类乳腺癌细胞样本和离体仓鼠口腔粘膜。该软件可以在其中一个开发机构的托管网页上免费获得,并且为用户提供了一种快速,易于使用且高效的工具来进行多/超光谱数据分解。

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