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Responses of microbial community from tropical pristine coastal soil to crude oil contamination

机译:热带原始沿海土壤微生物群落对原油污染的响应

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摘要

Brazilian offshore crude oil exploration has increased after the discovery of new reservoirs in the region known as pré-sal, in a depth of 7.000 m under the water surface. Oceanic islands near these areas represent sensitive environments, where changes in microbial communities due oil contamination could stand for the loss of metabolic functions, with catastrophic effects to the soil services provided from these locations. This work aimed to evaluate the effect of petroleum contamination on microbial community shifts (Archaea, Bacteria and Fungi) from Trindade Island coastal soils. Microcosms were assembled and divided in two treatments, control and contaminated (weathered crude oil at the concentration of 30 g kg−1), in triplicate. Soils were incubated for 38 days, with CO2 measurements every four hours. After incubation, the total DNA was extracted, purified and submitted for target sequencing of 16S rDNA, for Bacteria and Archaea domains and Fungal ITS1 region, using the Illumina MiSeq platform. Three days after contamination, the CO2 emission rate peaked at more than 20 × the control and the emissions remained higher during the whole incubation period. Microbial alpha-diversity was reduced for contaminated-samples. Fungal relative abundance of contaminated samples was reduced to almost 40% of the total observed species. Taxonomy comparisons showed rise of the Actinobacteria phylum, shifts in several Proteobacteria classes and reduction of the Archaea class Nitrososphaerales. This is the first effort in acquiring knowledge concerning the effect of crude oil contamination in soils of a Brazilian oceanic island. This information is important to guide any future bioremediation strategy that can be required.
机译:在位于水面以下7.000 m的称为pré-sal的地区发现了新的储层之后,巴西近海原油勘探活动有所增加。这些区域附近的海洋岛屿代表着敏感的环境,在这些环境中,由于油污染而引起的微生物群落变化可能代表新陈代谢功能的丧失,对这些地点提供的土壤服务产生了灾难性影响。这项工作旨在评估石油污染对Trindade岛沿岸土壤微生物群落变化(Archaea,细菌和真菌)的影响。缩影组装并分为两种处理,一式三份,分别为对照和污染(浓度为30 g kg -1 的风化原油)。将土壤培养38天,每四个小时测量一次CO2。孵育后,使用Illumina MiSeq平台提取,纯化总DNA,并将其用于细菌和古细菌域以及真菌ITS1区的16S rDNA靶序列测序。污染后三天,CO2排放速率达到了对照的20倍以上的峰值,并且在整个孵化期间的排放量仍然较高。污染样品的微生物α-多样性降低了。被污染样品的真菌相对丰度降低到所观察物种总数的近40%。分类学比较表明,放线放线菌的上升,几种变形杆菌属的转移和古生菌亚硝基球菌的减少。这是获得有关巴西大洋岛土壤中原油污染影响的知识的第一步。此信息对于指导将来可能需要的任何生物修复策略很重要。

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