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Molecular phylogeny of Panaspis and Afroablepharus skinks (Squamata: Scincidae) in the savannas of sub-Saharan Africa

机译:撒哈拉以南非洲热带稀树草原中的潘纳斯皮斯犬和可食噬性石龙子(鳞片:Scincaidae)的分子系统发育

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摘要

African snake-eyed skinks are relatively small lizards of the genera Panaspis and Afroablepharus. Species allocation of these genera frequently changed during the 20th century based on morphology, ecology, and biogeography. Members of these genera occur primarily in savanna habitats throughout sub-Saharan Africa and include species whose highly conserved morphology poses challenges for taxonomic studies. We sequenced two mitochondrial (16S and cyt b) and two nuclear genes (PDC and RAG1) from 95 Panaspis and Afroablepharus samples from across eastern, central, and southern Africa. Concatenated gene-tree and divergence-dating analyses were conducted to infer phylogenies and biogeographic patterns. Molecular data sets revealed several cryptic lineages, with most radiations occurring during the mid-Miocene to Pliocene. We infer that rifting processes (including the formation of the East African Rift System) and climatic oscillations contributed to the expansion and contraction of savannas, and caused cladogenesis in snake-eyed skinks. Species in Panaspis and Afroablepharus used in this study, including type species for both genera, formed a monophyletic group. As a result, the latter genus should be synonymized with the former, which has priority. Conservatively, we continue to include the West African species P. breviceps and P. togoensis within an expanded Panaspis, but note that they occur in relatively divergent clades, and their taxonomic status may change with improved taxon sampling. Divergence estimates and cryptic speciation patterns of snake-eyed skinks were consistent with previous studies of other savanna vertebrate lineages from the same areas examined in this study.
机译:非洲蛇眼石龙子是Panaspis和Afroablepharus属的相对较小的蜥蜴。根据形态,生态学和生物地理学,这些属的物种分布在20世纪经常发生变化。这些属的成员主要发生在整个撒哈拉以南非洲的热带稀树草原栖息地,包括其高度保守的形态对分类学研究构成挑战的物种。我们对来自非洲东部,中部和南部的95个Panaspis和Afroablepharus样品的两个线粒体(16S和cyt b)和两个核基因(PDC和RAG1)进行了测序。进行了级联的基因树和发散日期分析,以推断系统发育和生物地理模式。分子数据集揭示了几个隐秘谱系,大多数辐射发生在中新世中期至上新世。我们推断,裂谷过程(包括东非裂谷系统的形成)和气候波动导致了稀树草原的扩张和收缩,并导致了蛇眼石龙子成团。在这项研究中使用的Panaspis和Afroablepharus中的物种,包括两个属的类型物种,都构成了一个单系群。结果,后一属应与前者同义,后者具有优先权。保守地,我们继续将西非物种P. breviceps和P. togoensis包括在扩展的Panaspis中,但是请注意它们出现在相对不同的进化枝中,并且它们的分类学地位可能会随着分类单元采样的改善而改变。蛇眼石龙子的散度估计和神秘物种形成模式与本研究中相同地区的其他热带稀树草原脊椎动物谱系的先前研究一致。

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