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Diversity and Composition of Bacterial Community in Soils and Lake Sediments from an Arctic Lake Area

机译:北极湖区土壤和湖泊沉积物中细菌群落的多样性和组成

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摘要

This study assessed the diversity and composition of bacterial communities within soils and lake sediments from an Arctic lake area (London Island, Svalbard). A total of 2,987 operational taxonomic units were identified by high-throughput sequencing, targeting bacterial 16S rRNA gene. The samples from four sites (three samples in each site) were significantly different in geochemical properties and bacterial community composition. Proteobacteria and Acidobacteria were abundant phyla in the nine soil samples, whereas Proteobacteria and Bacteroidetes were abundant phyla in the three sediment samples. Furthermore, Actinobacteria, Chlorobi, Chloroflexi, Elusimicrobia, Firmicutes, Gemmatimonadetes, Nitrospirae, Planctomycetes, Proteobacteria significantly varied in their abundance among the four sampling sites. Additionally, members of the dominant genera, such as Clostridium, Luteolibacter, Methylibium, Rhodococcus, and Rhodoplanes, were significantly different in their abundance among the four sampling sites. Besides, distance-based redundancy analysis revealed that pH (p < 0.001), water content (p < 0.01), ammonium nitrogen (NH4+-N, p < 0.01), silicate silicon (SiO42--Si, p < 0.01), nitrite nitrogen (NO2--N, p < 0.05), organic carbon (p < 0.05), and organic nitrogen (p < 0.05) were the most significant factors that correlated with the bacterial community composition. The results suggest soils and sediments from a lake area in the Arctic harbor a high diversity of bacterial communities, which are influenced by many geochemical factors of Arctic environments.
机译:这项研究评估了北极湖区(伦敦岛,斯瓦尔巴群岛)的土壤和湖泊沉积物中细菌群落的多样性和组成。通过高通量测序,针对细菌16S rRNA基因共鉴定了2987个操作生物分类单位。来自四个地点的样本(每个地点三个样本)在地球化学性质和细菌群落组成方面存在显着差异。在这9个土壤样品中,细菌和酸性细菌是丰富的门,而在三个沉积物样品中,细菌和拟杆菌是丰富的门。此外,在四个采样点之间,放线菌,Chlorobi,Chloroflexi,Elusimicrobia,Firmicutes,Gemmatimonadetes,Nitrospirae,Planctomycetes,Proteobacteria的丰度明显不同。此外,优势属的成员,例如梭状芽胞杆菌,黄体杆菌,甲基异戊二烯,红球菌和杜鹃花,在四个采样点之间的丰度显着不同。此外,基于距离的冗余分析显示,pH(p <0.001),水含量(p <0.01),铵态氮( NH 4 + -N,p <0.01),硅酸盐硅( SiO 4 2- -Si,p <0.01),亚硝酸盐氮( 否< / mi> 2 - -N, p <0.05),有机碳(p <0.05)和有机氮(p <0.05)是与细菌群落组成相关的最重要因素。结果表明,北极湖区的土壤和沉积物具有高度多样性的细菌群落,这受到北极环境中许多地球化学因素的影响。

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