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Developing Human Radiation Biodosimetry Models: Testing Cross-Species Conversion Approaches Using an Ex Vivo Model System

机译:开发人体辐射生物剂量学模型:使用体内模型系统测试跨物种转换方法

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摘要

In the event of a large-scale radiation exposure, accurate and quick assessment of radiation dose received would be critical for triage and medical treatment of large numbers of potentially exposed individuals. Current methods of biodosimetry, such as the dicentric chromosome assay, are time consuming and require sophisticated equipment and highly trained personnel. Therefore, scalable biodosimetry approaches, including gene expression profiles in peripheral blood cells, are being investigated. Due to the limited availability of appropriate human samples, biodosimetry development has relied heavily on mouse models, which are not directly applicable to human response. Therefore, to explore the feasibility of using non-human primate (NHP) models to build and test a biodosimetry algorithm for use in humans, we irradiated ex vivo peripheral blood samples from both humans and rhesus macaques with doses of 0, 2, 5, 6 and 7 Gy, and compared the gene expression profiles 24 h later using Agilent human microarrays. Among the dose-responsive genes in human and using non-human primate, 52 genes showed highly correlated expression patterns between the species, and were enriched in p53/DNA damage response, apoptosis and cell cycle-related genes. When these interspecies-correlated genes were used to build biodosimetry models with using NHP data, the mean prediction accuracy on non-human primate samples was about 90% within 1 Gy of delivered dose in leave-one-out cross-validation. However, tests on human samples suggested that human gene expression values may need to be adjusted prior to application of the NHP model. A “multi-gene” approach utilizing all gene values for cross-species conversion and applying the converted values on the NHP biodosimetry models, gave a leave-one-out cross-validation prediction accuracy for human samples highly comparable (up to 94%) to that for non-human primates. Overall, this study demonstrates that a robust NHP biodosimetry model can be built using interspecies-correlated genes, and that, by using multiple regression-based cross-species conversion of expression values, absorbed dose in human samples can be accurately predicted by the NHP model.
机译:如果发生大规模的辐射暴露,则准确,快速地评估所接收的辐射剂量对于分流和医学治疗大量潜在暴露的个体至关重要。当前的生物剂量测定方法,例如双中心染色体测定法,很耗时,并且需要复杂的设备和训练有素的人员。因此,正在研究可扩展的生物剂量学方法,包括外周血细胞中的基因表达谱。由于适当的人类样品的可用性有限,生物剂量学的发展严重依赖于小鼠模型,而小鼠模型并不直接适用于人类反应。因此,为了探讨使用非人类灵长类动物(NHP)模型建立和测试用于人体的生物剂量学算法的可行性,我们以0、2、5、0的剂量辐照了人类和恒河猴的离体外周血样本6和7 Gy,并在24小时后使用安捷伦人体芯片比较了基因表达谱。在人类和使用非人类灵长类动物的剂量反应基因中,有52个基因在物种之间表现出高度相关的表达模式,并且富含p53 / DNA损伤反应,凋亡和细胞周期相关基因。当使用NHP数据将这些种间相关的基因用于建立生物剂量学模型时,通过留一法交叉验证,非人类灵长类动物样本的平均预测准确度在递送剂量的1 Gy内约为90%。但是,对人体样品的测试表明,在应用NHP模型之前,可能需要调整人体基因表达值。一种“多基因”方法,利用所有基因值进行跨物种转换,并将转换后的值应用到NHP生物剂量学模型中,为人类样品提供了一劳永逸的交叉验证预测准确性(高达94%)对于非人类灵长类动物而言。总体而言,这项研究表明,可以使用物种间相关的基因建立可靠的NHP生物剂量测定模型,并且通过使用基于回归的多种物种间的表达值转换,可以通过NHP模型准确预测人体样品中的吸收剂量。

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