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Complete mitochondrial genomes of two blattid cockroaches Periplaneta australasiae and Neostylopyga rhombifolia and phylogenetic relationships within the Blattaria

机译:完整的线虫基因组的两个Blattid蟑螂澳洲大i(Periplaneta australasiae)和新新孢子虫(Neostylopyga rhombifolia)以及the内的系统发育关系

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摘要

Complete mitochondrial genomes (mitogenomes) of two cockroach species, Periplaneta australasiae and Neostylopyga rhombifolia, 15,605 bp and 15,711 bp in length, respectively, were determined. As reported for other cockroach mitogenomes, the two mitogenomes possessed typical ancestral insect mitogenome gene composition and arrangement. Only several small intergenic spacers were found: one, which was common in all sequenced cockroach mitogenomes except for the genus Cryptocercus, was between tRNA-Ser (UCN) and ND1 and contained a 7bp highly conserved motif (WACTTAA). Three different types of short tandem repeats in the N. rhombifolia control region (CR) were observed. The homologous alignments of these tandem repeats with other six cockroach mitogenome CRs revealed a low similarity. Three conserved sequence blocks (CSB) were detected in both cockroach mitochondrial CRs. CSB1 was specific for blattinine mitogenomes and was highly conserved with 95% similarity, speculating that this block was a possible molecular synapomorphy for this subfamily. CSB3 located nearby downstream of CSB1 and has more variations within blattinine mitogenomes compared with CSB1. The CSB3 was capable of forming stable stem-loop structure with a small T-stretch in the loop portion. We assessed the influence of four datasets and two inference methods on topology within Orthopteroidea. All genes excluding the third codon positions of PCGs could generate more stable topology, and higher posterior probabilities than bootstrap values were presented at some branch nodes. The phylogenetic analysis with different datasets and analytical methods supported the monophyly of Dictyoptera and supported strongly the proposal that Isoptera should be classified as a family (Termitidae) of the Blattaria. Specifically, Shelfordella lateralis was inserted in the clade Periplaneta. Considering the K2P genetic distance, morphological characters, and the phylogenetic trees, we suggested that S. lateralis should be placed in the genus Periplaneta.
机译:确定了两种蟑螂的完整线粒体基因组(有丝分裂基因组),分别为澳大利亚长翅plane和菱形新长线虫,其长度分别为15,605 bp和15,711 bp。如对其他蟑螂有丝分裂基因组的报道,这两个有丝分裂基因组具有典型的祖先昆虫有丝分裂基因组基因组成和排列。只发现了几个小的基因间隔子:一个在除tRNA-Ser(UCN)和ND1之间,在所有测序的蟑螂有丝分裂基因组中都普遍存在,除了隐尾属,它包含一个7bp高度保守的基序(WACTTAA)。在菱形猪笼草控制区(CR)中观察到三种不同类型的短串联重复序列。这些串联重复序列与其他六个蟑螂有丝分裂基因组CR的同源比对显示出较低的相似性。在两个蟑螂线粒体CR中均检测到三个保守序列区(CSB)。 CSB1特异于blattinine有丝分裂基因组,并且高度保守,具有95%的相似性,推测该嵌段可能是该亚家族的可能的分子突触。与CSB1相比,CSB3位于CSB1下游附近,并且在Blattinine有丝分裂基因组中具有更多的变异。 CSB3能够形成稳定的茎环结构,在环部分具有小的T形拉伸。我们评估了四个数据集和两种推断方法对直翅类昆虫内部拓扑的影响。除某些PCG的第三个密码子位置外,所有基因均可产生更稳定的拓扑,并且在某些分支结点处呈现出比自举值更高的后验概率。用不同的数据集和分析方法进行的系统发育分析支持双翅目单翅目,并强烈支持将翼翅目归为Bl虫科(白蚁科)的提议。具体而言,将Shelfordellalateralis插入进化枝Periplaneta中。考虑到K2P的遗传距离,形态特征和系统发育树,我们建议将S.lateralis放置在Periplaneta属中。

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