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Diet Composition and Variability of Wild Octopus vulgaris and Alloteuthis media (Cephalopoda) Paralarvae: a Metagenomic Approach

机译:普通野生章鱼和别肢种(头足纲)副幼虫的饮食组成和变异性:一种基因组学方法

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摘要

The high mortality of cephalopod early stages is the main bottleneck to grow them from paralarvae to adults in culture conditions, probably because the inadequacy of the diet that results in malnutrition. Since visual analysis of digestive tract contents of paralarvae provides little evidence of diet composition, the use of molecular tools, particularly next generation sequencing (NGS) platforms, offers an alternative to understand prey preferences and nutrient requirements of wild paralarvae. In this work, we aimed to determine the diet of paralarvae of the loliginid squid Alloteuthis media and to enhance the knowledge of the diet of recently hatched Octopus vulgaris paralarvae collected in different areas and seasons in an upwelling area (NW Spain). DNA from the dissected digestive glands of 32 A. media and 64 O. vulgaris paralarvae was amplified with universal primers for the mitochondrial gene COI, and specific primers targeting the mitochondrial gene 16S gene of arthropods and the mitochondrial gene 16S of Chordata. Following high-throughput DNA sequencing with the MiSeq run (Illumina), up to 4,124,464 reads were obtained and 234,090 reads of prey were successfully identified in 96.87 and 81.25% of octopus and squid paralarvae, respectively. Overall, we identified 122 Molecular Taxonomic Units (MOTUs) belonging to several taxa of decapods, copepods, euphausiids, amphipods, echinoderms, molluscs, and hydroids. Redundancy analysis (RDA) showed seasonal and spatial variability in the diet of O. vulgaris and spatial variability in A. media diet. General Additive Models (GAM) of the most frequently detected prey families of O. vulgaris revealed seasonal variability of the presence of copepods (family Paracalanidae) and ophiuroids (family Euryalidae), spatial variability in presence of crabs (family Pilumnidae) and preference in small individual octopus paralarvae for cladocerans (family Sididae) and ophiuroids. No statistically significant variation in the occurrences of the most frequently identified families was revealed in A. media. Overall, these results provide new clues about dietary preferences of wild cephalopod paralarvae, thus opening up new scenarios for research on trophic ecology and digestive physiology under controlled conditions.
机译:头足类早期阶段的高死亡率是在养殖条件下将其从幼虫长成成人的主要瓶颈,这可能是因为饮食不足导致营养不良。由于目视分析寄生虫的消化道内容物不能提供饮食组成的证据,因此分子工具的使用,尤其是下一代测序(NGS)平台,为理解野生寄生虫的猎物偏好和营养需求提供了一种选择。在这项工作中,我们旨在确定菱形鱿鱼Alloteuthis媒介的幼虫的饮食,并增强对在上升区域(NW西班牙)不同地区和季节收集的最近孵化的八达通寻常食物的认识。使用针对线粒体基因COI的通用引物以及针对节肢动物的线粒体基因16S基因和Chordata的线粒体基因16S的特异性引物扩增了32个中层曲霉和64个寻常型拟南芥的消化腺的DNA。在使用MiSeq运行(Illumina)进行高通量DNA测序后,分别在96.87和81.25%的章鱼和鱿鱼幼虫中获得了多达4,124,464个读数,并成功鉴定出234,090个猎物。总体而言,我们确定了122个分子生物分类单位(MOTU),它们分别属于十足动物,pe足类,古生动物,两栖动物,棘皮动物,软体动物和类水生物的几个分类单元。冗余分析(RDA)显示寻常型O.garage饮食中的季节性和空间变异性以及A.media饮食中的空间变异性。最常见的普通捕食者的猎物家族的一般加性模型(GAM)显示了pe足类(副cal科)和蛇形类(真翅目)的存在的季节变异性,蟹((科的家族)存在的空间变异性和小种群的偏好螯虾(Sididae家族)和蛇形类的单个章鱼幼虫。在A. media中,没有发现最常发现的家族的发生在统计上的显着差异。总体而言,这些结果为野生头足类副幼虫的饮食偏爱提供了新的线索,从而为控制条件下的营养生态学和消化生理学研究开辟了新的场景。

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