Rapid Measurement of Long-Range Distances in Proteins by Multidimensional 13C-19F REDOR NMR under Fast Magic-Angle Spinning

摘要

The ability to simultaneously measure many long-range distances is critical to efficient and accurate determination of protein structures by solid-state NMR (SSNMR). So far, the most common distance constraints for proteins are ¹³C-¹⁵N distances, which are usually measured using the rotational-echo double-resonance (REDOR) technique. However, these measurements are restricted to distances of up to ~5 Å due to the low gyromagnetic ratios of ¹⁵N and ¹³C. Here we present a robust 2D ¹³C-¹⁹F REDOR experiment to measure multiple distances to ~10 Å. The technique targets proteins that contain a small number of recombinantly or synthetically incorporated fluorines. The ¹³C-¹⁹F REDOR sequence is combined with 2D ¹³C-¹³C correlation to resolve multiple distances in highly ¹³C-labeled proteins. We show that, at the high magnetic fields that are important for obtaining well resolved ¹³C spectra, the deleterious effect of the large ¹⁹F chemical shift anisotropy (CSA) for REDOR is ameliorated by fast magic-angle spinning (MAS) and is further taken into account in numerical simulations. We demonstrate this 2D ¹³C-¹³C resolved ¹³C-¹⁹F REDOR technique on ¹³C, ¹⁵N-labeled GB1. A 5-¹⁹F-Trp tagged GB1 sample shows the extraction of distances to a single fluorine atom, while a 3-¹⁹F-Tyr labeled GB1 sample allows us to evaluate the effects of multi-spin coupling and statistical ¹⁹F labeling on distance measurement. Finally, we apply this 2D REDOR experiment to membrane-bound influenza BM2 transmembrane peptide, and show that the distance between the proton-selective histidine residue and the gating tryptophan residue differs from the distances in the solution NMR structure of detergent-bound BM2. This 2D ¹³C-¹⁹F REDOR technique should facilitate SSNMR-based protein structure determination by increasing the measurable distances to the ~10 Å range.