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Unsupervised Capture and Profiling of Rare Immune Cells using Multi-Directional Magnetic Ratcheting

机译:使用多方向磁棘轮系统对稀有免疫细胞进行无监督捕获和分析

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摘要

Immunotherapies (IT) require induction, expansion, and maintenance of specific changes to a patient’s immune cell repertoire which yield a therapeutic benefit. Recently, mechanistic understanding of these changes at the cellular level has revealed that IT results in complex phenotypic transitions in target cells, and that therapeutic effectiveness may be predicted by monitoring these transitions during therapy. However, monitoring will require unique tools that enable capture, manipulation, and profiling of rare immune cell populations. In this study, we introduce a method of automated and unsupervised separation and processing of rare immune cells, using high-force and multidimensional magnetic ratcheting (MR). We demonstrate capture of target immune cells using samples with up to 1:10,000 target cell to background cell ratios from input volumes as small as 25 microliters (i.e. a low volume and low cell frequency sample sparing assay interface). Cell capture is shown to achieve up to 90% capture efficiency and purity, and captured cell analysis is shown using both on-chip culture/activity assays and off-chip ejection and nucleic acid analysis. These results demonstrate that multi-directional magnetic ratcheting offers a unique separation system for dealing with blood cell samples that contain either rare cells or significantly small volumes, and the “sample sparing” capability leads to an expanded spectrum of parameters that can be measured. These tools will be paramount to advancing techniques for immune monitoring under conditions in which both the sample volume and number of antigen-specific target cells are often exceedingly small, including during IT and treatment of allergy, asthma, autoimmunity, immunodeficiency, cell based therapy, transplantation, and infection.
机译:免疫疗法(IT)需要诱导,扩展和维持患者免疫细胞库的特定变化,从而产生治疗益处。最近,在细胞水平上对这些变化的机械理解表明,IT会导致靶细胞发生复杂的表型转变,并且可以通过在治疗过程中监测这些转变来预测治疗效果。但是,监测将需要能够捕获,操纵和分析稀有免疫细胞群的独特工具。在这项研究中,我们介绍了一种使用高强度多维磁棘轮(MR)的方法,自动,无监督地分离和处理稀有免疫细胞的方法。我们展示了使用高达25:1的输入体积(即低体积和低细胞频率的样品备用测定接口)的输入体积具有高达1:10,000靶细胞与背景细胞比例的样品捕获靶免疫细胞的方法。显示细胞捕获可实现高达90%的捕获效率和纯度,并且使用芯片上培养/活性分析以及芯片外弹出和核酸分析显示捕获的细胞分析。这些结果表明,多向磁棘轮系统为处理包含稀有细胞或极小体积的血细胞样品提供了独特的分离系统,并且“样品保留”功能可扩展可测量参数的范围。这些工具对于先进的免疫监控技术至关重要,在这种情况下,样本量和抗原特异性靶细胞的数量通常都非常小,包括在IT和过敏,哮喘,自身免疫,免疫缺陷,基于细胞的治疗,移植和感染。

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