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Computational assessment of stomach tumor volume from multi-slice computerized tomography images in presence of type 2 cancer

机译:在存在2型癌症的情况下通过多层计算机断层扫描图像对胃肿瘤体积进行计算评估

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摘要

>Background: The multi–slice computerized tomography (MSCT) is a medical imaging modality that has been used to determine the size and location of the stomach cancer. Additionally, MSCT is considered the best modality for the staging of gastric cancer. One way to assess the type 2 cancer of stomach is by detecting the pathological structure with an image segmentation approach. The tumor segmentation of MSCT gastric cancer images enables the diagnosis of the disease condition, for a given patient, without using an invasive method as surgical intervention. >Methods: This approach consists of three stages. The initial stage, an image enhancement, consists of a method for correcting non homogeneities present in the background of MSCT images. Then, a segmentation stage using a clustering method allows to obtain the adenocarcinoma morphology. In the third stage, the pathology region is reconstructed and then visualized with a three–dimensional (3–D) computer graphics procedure based on marching cubes algorithm. In order to validate the segmentations, the Dice score is used as a metric function useful for comparing the segmentations obtained using the proposed method with respect to ground truth volumes traced by a clinician. >Results: A total of 8 datasets available for patients diagnosed, from the cancer data collection of the project, Cancer Genome Atlas Stomach Adenocarcinoma (TCGASTAD) is considered in this research. The volume of the type 2 stomach tumor is estimated from the 3–D shape computationally segmented from the each dataset. These 3–D shapes are computationally reconstructed and then used to assess the morphopathology macroscopic features of this cancer. >Conclusions: The segmentations obtained are useful for assessing qualitatively and quantitatively the stomach type 2 cancer. In addition, this type of segmentation allows the development of computational models that allow the planning of virtual surgical processes related to type 2 cancer.
机译:>背景:多层计算机断层扫描(MSCT)是一种医学成像手段,已被用于确定胃癌的大小和位置。此外,MSCT被认为是胃癌分期的最佳方式。评估胃2型癌症的一种方法是通过使用图像分割方法检测病理结构。 MSCT胃癌图像的肿瘤分割能够针对给定的患者诊断疾病状况,而无需使用侵入性方法作为外科手术干预。 >方法:该方法包括三个阶段。初始阶段是图像增强,由一种校正MSCT图像背景中存在的非均匀性的方法组成。然后,使用聚类方法的分割阶段允许获得腺癌形态。在第三阶段,病理区域被重建,然后使用基于行进立方体算法的三维(3D)计算机图形程序进行可视化。为了验证分割,将Dice分数用作度量函数,该功能可用于比较相对于临床医生追踪的地面真实体积,使用所提出的方法获得的分割。 >结果:本研究考虑了从该项目的癌症数据收集中获得的共8个可用于诊断患者的数据集,即癌症基因组图集胃腺癌(TCGASTAD)。 2型胃肿瘤的体积是根据每个数据集的3D形状计算得出的。这些3D形状经过计算重建,然后用于评估该癌症的形态病理学宏观特征。 >结论:获得的分割可用于定性和定量评估2型胃癌。另外,这种类型的分割允许开发计算模型,该计算模型允许计划与2型癌症相关的虚拟手术过程。

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