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A Robust Structural PGN Model for Control of Cell-Cycle Progression Stabilized by Negative Feedbacks

机译:用于控制负反馈稳定的细胞周期进程的鲁棒结构PGN模型

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摘要

The cell division cycle comprises a sequence of phenomena controlled by a stable and robust genetic network. We applied a probabilistic genetic network (PGN) to construct a hypothetical model with a dynamical behavior displaying the degree of robustness typical of the biological cell cycle. The structure of our PGN model was inspired in well-established biological facts such as the existence of integrator subsystems, negative and positive feedback loops, and redundant signaling pathways. Our model represents genes interactions as stochastic processes and presents strong robustness in the presence of moderate noise and parameters fluctuations. A recently published deterministic yeast cell-cycle model does not perform as well as our PGN model, even upon moderate noise conditions. In addition, self stimulatory mechanisms can give our PGN model the possibility of having a pacemaker activity similar to the observed in the oscillatory embryonic cell cycle.
机译:细胞分裂周期包括由稳定和强大的遗传网络控制的一系列现象。我们应用概率遗传网络(PGN)构造了一个假设模型,该模型具有显示生物细胞周期典型鲁棒程度的动力学行为。我们的PGN模型的结构受到了公认的生物学事实的启发,例如积分子系统的存在,负反馈回路和正反馈回路以及冗余的信号通路。我们的模型将基因相互作用表示为随机过程,并在存在中等噪声和参数波动的情况下表现出强大的鲁棒性。即使在中等噪声条件下,最近发布的确定性酵母细胞周期模型的性能也不如我们的PGN模型好。另外,自我刺激机制可以使我们的PGN模型具有起搏器活性,类似于在振荡胚胎细胞周期中观察到的起搏器活性。

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