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Two sex-chromosome-linked microsatellite loci show geographic variance among North American Ostrinia nubilalis

机译:两个性染色体相关的微卫星基因座显示了北美洲骨灰Ost之间的地理差异

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摘要

PCR-based O. nubilalis population and pedigree analysis indicated female specificity of a (GAAAAT)n microsatellite, and male specificity of a CAYCARCGTCACTAA repeat unit marker. These loci were respectively named Ostrinia nubilalis W-chromosome 1 (ONW1) and O. nubilalis Z-chromosome 1 (ONZ1). Intact repeats of three, four, or five GAAAAT units are present among ONW1 alleles, and biallelic variation exists at the ONZ1 locus. Screening of 493 male at ONZ1 and 448 heterogametic females at ONZ1 and ONW1 loci from eleven North American sample sites was used to construct genotypic data. Analysis of molecular variance (AMOVA) and F-statistics indicated no female haplotype or male ONZ1 allele frequency differentiation between voltinism ecotypes. Four subpopulations from northern latitudes, Minnesota and South Dakota, showed the absence of a single female haplotype, a significant deviation of ONZ1 data from Hardy-Weinberg expectation, and low-level geographic divergence from other subpopulations. Low ONZ1 and ONW1 allele diversity could be attributed either to large repeat unit sizes, low repeat number, reduced effective population (Ne) size of sex chromosomes, or the result of recent O. nubilalis introduction and population expansion, but likely could not be due to inbreeding. These sequences have been deposited in GenBank , and .
>Abbreviation:
>
ONW1
Ostrinia nubilalis W-chromosome marker number 1
ONZ1
Ostrinia nubilalis Z-chromosome marker number 1
class="kwd-title">Keywords: Ostrinia, Pyraloidea, microsatellite, sex-linked genetic markers class="head no_bottom_margin" id="s1title" style="text-transform: uppercase;">IntroductionMicrosatellites are repetitive nucleotide elements that have a core repeat structure of 2 to 6 nucleotides (). Microsatellite allele mutations predominantly occur via strand slippage during chromosome replication at a rate of 10−6 to 10−2 (), and is influenced by repeat unit length, number of repeat units in the array, microsatellite flanking sequence, and recombination ().Ostrinia nubilalis (Hübner), the European corn borer, is an invasive agricultural pest in North America introduced from Europe around 1917. The herbivorous O. nubilalis larvae are adapted to feeding on cultivated Zea mays (L.) and annually cause major economic losses (). Phenotypic diversity in the North American population is present in two sex pheromone races, and three voltinism types (). Females of the two sex pheromone races are differentiated by their emission of either E- or Z-11-tetradecenyl acetate as the dominant pheromone component. Pheromone races show little allozyme marker differentiation (; ; ). They interbreed in the laboratory and under natural conditions continual gene flow between the races apparently occurs (; ). In contrast, diapause ecotypes differ in the number of degree days required prior to adult emergence (), and the resultant asynchrony of adult mating cycles between voltinism types was suggested to minimize genetic exchange (). Reduced gene flow between voltinism ecotypes was supported by RAPD-PCR marker data (), but not by allozyme marker () or mitochondrial RFLP data (href="#i1536-2442-003-29-0001-marcon1" rid="i1536-2442-003-29-0001-marcon1" class=" bibr popnode tag_hotlink tag_tooltip" id="__tag_96702447">Marcon et al., 1999).To date, locus specific genetic markers used for O. nubilalis population analysis have inherent limitations that restrict the levels of variation detected, which might contribute to the conflicting evidence provided between O. nubilalis ecotypes. Intraspecific diversity of allozyme markers is reduced by negative selection on nonsynonymous changes and environmental influence on post translational modification pathways (href="#i1536-2442-003-29-0001-hartel1" rid="i1536-2442-003-29-0001-hartel1" class=" bibr popnode">Hartel 1988). Mitochondrial DNA is also prone to fixation by genetic drift due to a reduced effective population size of the molecule compared to chromosomes (href="#i1536-2442-003-29-0001-avise2" rid="i1536-2442-003-29-0001-avise2" class=" bibr popnode tag_hotlink tag_tooltip" id="__tag_96702453">Avise et al., 1988). Given the limitations of previously used markers, unresolved questions regarding gene flow among North American ecotypes, and our desire to estimate both male- and female-based population differentiation (movement), we developed sex-specific O. nubilalis nuclear microsatellite markers. In the following allele variation of the North American population is characterized at two such markers, ONW1 (Ostrinia nubilalis W-chromosome 1) and ONZ1 (Ostrinia nubilalis Z-chromosome 1). Genotypic and haplotypic data were used to evaluate intraspecies differences, infer the presence of any population subdivision, and estimate the levels of genetic exchange (migration) among O. nubilalis voltinism ecotypes and geographically distinct North American subpopulations.
机译:基于PCR的O.nubilalis种群和血统分析表明(GAAAAT)n微卫星的女性特异性,以及CAYCARCGTCACTAA重复单元标记的男性特异性。这些基因座分别命名为Ostrinia nubilalis W染色体1(ONW1)和O. nubilalis Z染色体1(ONZ1)。 ONW1等位基因之间存在三个,四个或五个GAAAAT单元的完整重复序列,ONZ1基因座处存在双等位基因变异。从北美的11个样本站点筛选了ONZ1​​处的493位男性和ONZ1位和ONW1位点的448位异配子雌性,以构建基因型数据。分子变异(AMOVA)和F统计量的分析表明,在个体性生态型之间没有女性单倍型或男性ONZ1等位基因频率差异。来自北纬的四个子种群,明尼苏达州和南达科他州,显示没有单个雌性单倍型,ONZ1数据与Hardy-Weinberg的期望存在显着偏差,并且与其他子种群的地理分布差异较小。 ONZ1和ONW1等位基因多样性低可能归因于重复单元大小大,重复数低,性染色体的有效种群(Ne)大小减少,或者是最近引入的O. nubilalis和种群扩展的结果,但可能不是由于近交。这些序列已存放在GenBank和。
>缩写:
> ONW1
脐橙W-染色体标记数1 ONZ1
脐橙Z-染色体标记数1 class =“ kwd-title”>关键字: Ostrinia,Pyraloidea,微卫星,性别相关的遗传标记 class =“ head no_bottom_margin” id =“ s1title” style =“ text-transform:大写;” >简介微卫星是具有2至6个核苷酸的核心重复结构的重复核苷酸元素()。微卫星等位基因突变主要发生在染色体复制过程中,以链滑移的形式发生,速率为10 -6 至10 -2 (),并且受重复单位长度,重复次数的影响玉米是欧洲玉米bore,是一种入侵性农业害虫,于1917年左右从欧洲传入北美。草食性稻O幼虫适合于摄食种植的Zea mays(L.),每年造成重大经济损失()。北美人口的表型多样性存在于两种性信息素族和三种伏地话类型中。两个性别信息素族的雌性通过释放作为主要信息素成分的E-或Z-11-十四碳烯基乙酸酯来区分。信息素种族几乎没有同工酶标记差异(;;)。他们在实验室中杂交,并且在自然条件下,种族之间的连续基因流显然会发生(;)。相比之下,滞育生态型在成年之前所需的度数天数上有所不同(),并建议在伏地病类型之间成年交配周期的异步性可最大程度地减少遗传交换()。 RAPD-PCR标记数据()而不是同工酶标记()或线粒体RFLP数据(href =“#i1536-2442-003-29-0001-marcon1” rid =“ i1536-2442-003-29-0001-marcon1“ class =” bibr popnode tag_hotlink tag_tooltip“ id =” __ tag_96702447“> Marcon et al。,1999 )。迄今为止,基因位点特异性的遗传标记已被用于O. nubilalis种群分析具有固有的局限性,限制了所检测到的变异水平,这可能会导致在“物种”之间提供相互矛盾的证据。 nubilalis 生态型。通过对非同义变化的负选择和对翻译后修饰途径的环境影响,减少了同工酶标记的种内多样性(href =“#i1536-2442-003-29-0001-hartel1” rid =“ i1536-2442-003-29 -0001-hartel1“ class =” bibr popnode“> Hartel 1988 )。线粒体DNA也容易因遗传漂移而固定,这是因为与染色体相比,分子的有效种群数量减少了(href =“#i1536-2442-003-29-0001-avise2” rid =“ i1536-2442-003 -29-0001-avise2“ class =” bibr popnode tag_hotlink tag_tooltip“ id =” __ tag_96702453“>访问等人。,1988 )。鉴于先前使用的标记的局限性,有关北美生态型之间基因流的未解决问题以及我们希望估计基于男性和女性的人口分化(运动)的需求,我们开发了针对性别的 O。核微卫星标记。接下来,北美人群的等位基因变异以两个这样的标记为特征,ONW1( Ostrinia nubilalis W染色体1)和ONZ1( Ostrinia nubilalis Z-染色体1)。基因型和单倍型数据被用来评估种内差异,推断任何种群细分的存在,并估计 O“之间的遗传交换(迁移)水平。 nubilalis的生态类型和北美洲地理上不同的亚种群。

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