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BacMap: an up-to-date electronic atlas of annotated bacterial genomes

机译:BacMap:带注释的细菌基因组的最新电子图集

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摘要

Originally released in 2005, BacMap is an electronic, interactive atlas of fully sequenced bacterial genomes. It contains fully labeled, zoomable and searchable chromosome maps for essentially all sequenced prokaryotic (archaebacterial and eubacterial) species. Each map can be zoomed to the level of individual genes and each gene is hyperlinked to a richly annotated gene card. The latest release of BacMap () now contains data for more than 1700 bacterial species (∼10× more than the 2005 release), corresponding to more than 2800 chromosome and plasmid maps. All bacterial genome maps are now supplemented with separate prophage genome maps as well as separate tRNA and rRNA maps. Each bacterial chromosome entry in BacMap also contains graphs and tables on a variety of gene and protein statistics. Likewise, every bacterial species entry contains a bacterial ‘biography’ card, with taxonomic details, phenotypic details, textual descriptions and images (when available). Improved data browsing and searching tools have also been added to allow more facile filtering, sorting and display of the chromosome maps and their contents.
机译:BacMap最初于2005年发布,它是一个完整序列化细菌基因组的电子交互式地图集。它包含了几乎所有测序的原核生物(古细菌和真细菌)物种的完全标记,可缩放和可搜索的染色体图。每个图谱都可以缩放到单个基因的水平,每个基因都可以超链接到带有丰富注释的基因卡。现在,最新版本的BacMap()包含超过1700种细菌的数据(比2005年版本多10倍),对应于2800多个染色体和质粒图谱。现在,所有细菌基因组图谱都补充有单独的噬菌体基因组图谱以及单独的tRNA和rRNA图谱。 BacMap中的每个细菌染色体条目还包含有关各种基因和蛋白质统计数据的图表。同样,每个细菌物种条目都包含一张细菌“传记”卡,其中包含分类详细信息,表型详细信息,文字描述和图像(如果有)。还添加了改进的数据浏览和搜索工具,以允许更容易地过滤,分类和显示染色体图谱及其内容。

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