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Nuclear microsatellite and mitochondrial DNA analyses reveal the regional genetic structure and phylogeographical history of a sanguivorous land leech Haemadipsa japonica in Japan

机译:核微卫星和线粒体DNA分析揭示了日本三齿陆le(Haemadipsa japonica)的区域遗传结构和系统地理史

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摘要

Recent molecular studies have indicated that phylogeographical history of Japanese biota is likely shaped by geohistory along with biological events, such as distribution shifts, isolation, and divergence of populations. However, the genetic structure and phylogeographical history of terrestrial Annelida species, including leech species, are poorly understood. Therefore, we aimed to understand the genetic structure and phylogeographical history across the natural range of Haemadipsa japonica, a sanguivorous land leech species endemic to Japan, by using nine polymorphic nuclear microsatellites (nSSR) and cytochrome oxidase subunit one (COI) sequences of mitochondrial DNA (mtDNA). Analyses using nSSR revealed that H. japonica exhibited a stronger regional genetic differentiation among populations (G'ST = 0.77) than other animal species, probably because of the low mobility of land leech. Analyses using mtDNA indicated that H. japonica exhibited two distinct lineages (A and B), which were estimated to have diverged in the middle Pleistocene and probably because of range fragmentation resulting from climatic change and glacial and interglacial cycles. Lineage A was widely distributed across Japan, and lineage B was found in southwestern Japan. Analyses using nSSR revealed that lineage A was roughly divided into two population groups (i.e., northeastern and southwestern Japan); these analyses also revealed a gradual decrease in genetic diversity with increasing latitude in lineage A and a strong genetic drift in populations of northeastern Japan. Combined with the largely unresolved shallow polytomies from the mtDNA phylogeny, these results implied that lineage A may have undergone a rapid northward migration, probably during the Holocene. Then, the regional genetic structure with local unique gene pools may have been formed within each lineage because of the low mobility of this leech species.
机译:最近的分子研究表明,日本生物区系的地理志史可能受地理历史以及诸如分布变化,隔离和种群分散等生物事件的影响。但是,人们对包括An在内的陆生Annelida物种的遗传结构和系统地理史知之甚少。因此,我们旨在通过使用9种多态核微卫星(nSSR)和线粒体DNA的细胞色素氧化酶亚基之一(COI)序列,来了解日本特有的三食陆le物种Haemadipsa japonica自然范围内的遗传结构和系统地理史。 (mtDNA)。使用nSSR进行的分析表明,粳稻表现出比其他动物更强的种群间区域遗传分化(G'ST = 0.77),这可能是由于陆地水mobility的移动性较低。使用mtDNA进行的分析表明,日本粳稻表现出两个不同的谱系(A和B),据估计它们在中更新世中发散了,可能是由于气候变化以及冰川和冰川间的循环造成的范围碎片化。血统A在日本广泛分布,血统B在日本西南部发现。使用nSSR进行的分析表明,谱系A大致分为两个人群(即日本东北和西南日本);这些分析还表明,随着谱系A纬度的增加和日本东北部人口的强烈遗传漂移,遗传多样性逐渐减少。这些结果与来自mtDNA系统发育的大部分尚未解析的浅部多形体相结合,这些结果表明沿袭A可能已经经历了迅速的北移,可能是在全新世期间。然后,由于该水ech物种的低迁移率,可能在每个谱系内形成了具有局部独特基因库的区域遗传结构。

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