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Open Targets Platform: new developments and updates two years on

机译:开放目标平台:两年来的新发展和更新

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摘要

The Open Targets Platform integrates evidence from genetics, genomics, transcriptomics, drugs, animal models and scientific literature to score and rank target-disease associations for drug target identification. The associations are displayed in an intuitive user interface (), and are available through a REST-API () and a bulk download (). In addition to target-disease associations, we also aggregate and display data at the target and disease levels to aid target prioritisation. Since our first publication two years ago, we have made eight releases, added new data sources for target-disease associations, started including causal genetic variants from non genome-wide targeted arrays, added new target and disease annotations, launched new visualisations and improved existing ones and released a new web tool for batch search of up to 200 targets. We have a new URL for the Open Targets Platform REST-API, new REST endpoints and also removed the need for authorisation for API fair use. Here, we present the latest developments of the Open Targets Platform, expanding the evidence and target-disease associations with new and improved data sources, refining data quality, enhancing website usability, and increasing our user base with our training workshops, user support, social media and bioinformatics forum engagement.
机译:开放目标平台整合了遗传学,基因组学,转录组学,药物,动物模型和科学文献中的证据,对目标-疾病关联进行评分和排名,以进行药物目标识别。关联显示在直观的用户界面()中,可通过REST-API()和批量下载()获得。除了目标疾病关联之外,我们还在目标和疾病水平上汇总和显示数据,以帮助确定目标优先顺序。自两年前首次发布以来,我们已经发布了8个版本,为靶标疾病关联添加了新的数据源,开始包括非全基因组靶点阵列的因果遗传变异,添加了新的靶标和疾病注释,启动了新的可视化并改善了现有的并发布了新的网络工具,可批量搜索多达200个目标。我们为Open Targets Platform REST-API提供了新的URL,提供了新的REST端点,并且也不再需要对API合理使用进行授权。在这里,我们介绍开放目标平台的最新发展,通过新的和改进的数据源扩展证据和目标疾病的关联,完善数据质量,增强网站的可用性,并通过我们的培训讲习班,用户支持,社交网络扩大用户群媒体和生物信息学论坛参与度。

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