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A14 Estimating time since HIV infection using next-generation sequencing data: A unique tool to help understand HIV prevention among high-risk young women in Ukraine

机译:A14使用下一代测序数据估算自艾滋病毒感染以来的时间:帮助了解乌克兰高危年轻女性中艾滋病毒预防的独特工具

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摘要

The transitions study examines HIV risk among adolescent girls and young women through their sexual life course from first sex, to past and current engagement in casual sex, transactional sex, and, for some, formal sex work (FSW). Understanding the timing of HIV infection and the circumstances around early infection in young females is critical to HIV prevention interventions. We inferred time since HIV infection using next-generation sequencing (NGS) of the HIV pol gene isolated from cross-sectional samples among high-risk young women in Dnipro, Ukraine. Dried blood spots were collected on Whatman 903 cards from young women aged 14–24 engaged in casual sex (n = 894), transactional sex (n = 464), and FSW (n = 452). The HIV pol gene was sequenced using an in-house NGS HIV drug resistance mutation genotyping assay. Time since HIV infection was inferred using an online tool as described by Puller et al. (2017) freely available at https://hiv.biozentrum.unibas.ch/ETI/. The mean estimated time since HIV infection (ETI) for participants engaged in casual sex, transactional sex, and FSW is 1.98, 1.84, and 3.01 years, respectively. ETI was used to determine the duration of HIV infection for each participant and compared to the number of sexually active years prior to FSW. Among FSW, 61 per cent of participants were infected with HIV prior to entry into sex work. In general, ETI from NGS data suggests that FSWs were infected with HIV before entry into FSW. Expansion of targeted prevention programs beyond FSW could play an important role in mitigating HIV transmission at the population level.
机译:过渡研究研究了从初次性行为到过去和现在从事休闲性行为,性交易以及某些正式性工作(FSW)的性生活过程,青春期少女和年轻女性的艾滋病毒风险。了解艾滋病毒感染的时机和年轻女性早期感染的情况对于预防艾滋病毒的干预措施至关重要。我们从乌克兰第聂伯河的高危年轻妇女的横断面样本中分离出的HIV pol基因的新一代测序(NGS)推断出HIV感染以来的时间。在Whatman 903卡上收集了来自14至24岁的年轻女性的干血斑,这些女性从事休闲性活动(n = 894),性交性行为(n = 464)和FSW(n = 452)。使用内部NGS HIV耐药性突变基因分型测定法对HIV pol基因进行测序。如Puller等人所述,使用在线工具推断出HIV感染的时间。 (2017)可在https://hiv.biozentrum.unibas.ch/ETI/免费获得。从事休闲性行为,性交易性行为和FSW的参与者自HIV感染(ETI)以来的平均估计时间分别为1.98、1.84和3.01年。 ETI用于确定每个参与者的HIV感染持续时间,并将其与FSW之前发生性行为的年数进行比较。在FSW中,有61%的参与者在从事性工作之前感染了艾滋病毒。一般而言,来自NGS数据的ETI表明,FSW在进入FSW之前已感染了HIV。将有针对性的预防计划扩展到FSW之外,可以在减轻艾滋病在人群水平上的传播中发挥重要作用。

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