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Entropy complexity and Markov diagrams for random walk cancer models

机译:随机游动癌症模型的熵复杂度和马尔可夫图

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摘要

The notion of entropy is used to compare the complexity associated with 12 common cancers based on metastatic tumor distribution autopsy data. We characterize power-law distributions, entropy, and Kullback-Liebler divergence associated with each primary cancer as compared with data for all cancer types aggregated. We then correlate entropy values with other measures of complexity associated with Markov chain dynamical systems models of progression. The Markov transition matrix associated with each cancer is associated with a directed graph model where nodes are anatomical locations where a metastatic tumor could develop, and edge weightings are transition probabilities of progression from site to site. The steady-state distribution corresponds to the autopsy data distribution. Entropy correlates well with the overall complexity of the reduced directed graph structure for each cancer and with a measure of systemic interconnectedness of the graph, called graph conductance. The models suggest that grouping cancers according to their entropy values, with skin, breast, kidney, and lung cancers being prototypical high entropy cancers, stomach, uterine, pancreatic and ovarian being mid-level entropy cancers, and colorectal, cervical, bladder, and prostate cancers being prototypical low entropy cancers, provides a potentially useful framework for viewing metastatic cancer in terms of predictability, complexity, and metastatic potential.
机译:熵的概念用于根据转移性肿瘤分布尸检数据比较与12种常见癌症相关的复杂性。我们将与每种原发癌相关的幂律分布,熵和Kullback-Liebler散度与所有汇总的所有癌症类型的数据进行比较。然后,我们将熵值与与马尔可夫链动力学系统进展模型相关的其他复杂性度量相关联。与每种癌症相关的马尔可夫转移矩阵与有向图模型相关,其中结点是转移性肿瘤可能发生的解剖位置,边缘权重是从一个部位到另一个部位进展的转移概率。稳态分布对应于尸体解剖数据分布。熵与每种癌症的缩小的有向图结构的整体复杂性以及图的系统互连性(称为图电导)的度量密切相关。这些模型建议按照癌症的熵值对癌症进行分类,其中皮肤癌,乳腺癌,肾癌和肺癌是典型的高熵癌,胃癌,子宫癌,胰腺癌和卵巢癌是中度熵癌,而结直肠癌,宫颈癌,膀胱癌和前列腺癌是典型的低熵癌症,就可预测性,复杂性和转移潜力而言,为查看转移癌提供了潜在有用的框架。

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